Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Spst6g00707 ATGCATTCCTGGAAACTTCTCCTCCTCTCCGCCGCCCTCATCTTCGCCGCCTTGGGAGTCAAAGTCTCTCTTCCAGTAGCAGCCACTCAGCTCCCTCTCCTCTGGACCTCCTTCCTCCTCTTCCTCAAGCCTCCTTACCTCTTCCTCCTTCTCAACACCATCATCATATCCATCGTCGCATCCTCCAGATTCCACCACCCAAAACATCAACCCGGCTCAACTCCTCCTCCTCCTCCTACCCCTCCTCCTCCACAGATTCAATCCCCGCCACCCACAGCTCCAGAACCACCGCTTCTCGAAATAAAAGCCGTATTTGTTAACGGTTCCGCCGTGCTCCAAGAAGAAGAAGAGGAAAAGAAAGTAATAAACCAAGGAATGACAGTAAAGAGAACAGACTCGACGGAGATTCCATCGCCGTCGGAGAAACCTCTCTTGTCTGCTAGGTTCACTCAACGGAAATTCCTTAAATCCACTAGTGAAGGTGGGAGAGCGTTGAGGGTGGTGGCCAAGGCGAAACGGCACGAAACGTTGGAGAGCACGTGGAAGGCCATAACGGAGGGTCGATCCATGCCATTGAGCAGACACATGAAGAAGTGTGACACGTGGCACAGCCGCGGCAACCTCGCCCCACCCCCGGAAAACAAGTCCGATGAGACATTCAGCGAGGTGCCAAGCGCCGGGAGGCTGCGGAAAGAACCGTCGCTGAGTCAAGAGGAGTTGAATCGGCGCGTGGAAGCGTTCATACGGAAGTTCAACGACGAGATGAGGTTGCAGAGACAACAATCCTTAGAACAGTACATGCAGATGATTAACCGCGGTGCCGCTTAA 828 0.5374 MHSWKLLLLSAALIFAALGVKVSLPVAATQLPLLWTSFLLFLKPPYLFLLLNTIIISIVASSRFHHPKHQPGSTPPPPPTPPPPQIQSPPPTAPEPPLLEIKAVFVNGSAVLQEEEEEKKVINQGMTVKRTDSTEIPSPSEKPLLSARFTQRKFLKSTSEGGRALRVVAKAKRHETLESTWKAITEGRSMPLSRHMKKCDTWHSRGNLAPPPENKSDETFSEVPSAGRLRKEPSLSQEELNRRVEAFIRKFNDEMRLQRQQSLEQYMQMINRGAA 275
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Spst6g00707 275 Pfam Cotton fibre expressed protein 237 272 IPR008480 -
Spst6g00707 275 Pfam Domain of unknown function (DUF4408) 32 64 IPR025520 -
Spst6g00707 275 PANTHER COTTON FIBER (DUF761) 25 273 - -
Spst6g00707 275 MobiDBLite consensus disorder prediction 70 93 - -
Spst6g00707 275 MobiDBLite consensus disorder prediction 66 93 - -
Spst6g00707 275 MobiDBLite consensus disorder prediction 202 236 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Spst6g00707 Spst-Chr6 6396528 6397651 Dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Spst6g00707 - - vra:106775373 360.918
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Spst6g00707 6 6396528 6397651 Spst6g00707 6 6396528 6397651 ECH