Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Spst6g00647 ATGGGGTGCGTTAAGGTTTGGTTTTGTGTGTTGAGTGTGTTGGGGTTGGTGATCGTGGGTGATGTTACCAACGCTCAAGATTCACCAGCAGACTACGTGAACGCACAGAACGTTGTAAGGTCACAGGTTGGTGTCGGAAAGATAGTTTGGGATGACACTGTTGCTGCTTTTGCACAGAACTATGCTAATCAGCGTAAAGATTGCCAACTTATCCATTCTGGCGGTGGTGGAAAATACGGGGAGAATATTGCCATGAGCACTGGTGACATGAGTGGCACAGAGGCAGTGAAATTGTGGGTGGATGAGAAACCCTACTATGACTACGCTTCTAACACTTGTGTTGGTGGAGAGTGTCTGCACTACACTCAGGTTGTTTGGAGAAACTCTGTGCGTCTTGGATGTGCCAAAGTAAGATGCGACAACGGAGGCACCTTCATCACTTGCAACTATTCTCCCCCTGGCAACTATATTGGCGAAAGACCCTACTGA 489 0.4785 MGCVKVWFCVLSVLGLVIVGDVTNAQDSPADYVNAQNVVRSQVGVGKIVWDDTVAAFAQNYANQRKDCQLIHSGGGGKYGENIAMSTGDMSGTEAVKLWVDEKPYYDYASNTCVGGECLHYTQVVWRNSVRLGCAKVRCDNGGTFITCNYSPPGNYIGERPY 162
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Spst6g00647 162 FunFam Putative pathogenesis-related protein 1 26 162 - -
Spst6g00647 162 PRINTS Allergen V5/Tpx-1 family signature 95 108 IPR001283 -
Spst6g00647 162 PRINTS Allergen V5/Tpx-1 family signature 48 66 IPR001283 -
Spst6g00647 162 PRINTS Allergen V5/Tpx-1 family signature 145 158 IPR001283 -
Spst6g00647 162 PRINTS Allergen V5/Tpx-1 family signature 118 134 IPR001283 -
Spst6g00647 162 Pfam Cysteine-rich secretory protein family 33 150 IPR014044 -
Spst6g00647 162 SUPERFAMILY PR-1-like 19 162 IPR035940 -
Spst6g00647 162 PANTHER CYSTEINE-RICH SECRETORY PROTEIN-RELATED 30 159 IPR001283 -
Spst6g00647 162 SMART SCP_3 27 158 IPR014044 -
Spst6g00647 162 PRINTS Venom allergen 5 signature 117 136 IPR002413 -
Spst6g00647 162 PRINTS Venom allergen 5 signature 48 66 IPR002413 -
Spst6g00647 162 PRINTS Venom allergen 5 signature 93 108 IPR002413 -
Spst6g00647 162 Gene3D CAP 27 162 IPR035940 -
Spst6g00647 162 ProSitePatterns CRISP family signature 2. 145 156 IPR018244 GO:0005576
Spst6g00647 162 CDD CAP_PR-1 29 162 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Spst6g00647 Spst-Chr6 5859427 5859915 Tandem
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Spst6g00647 K13449 - gmx:100805116 278.485
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Spst6g00647 6 5859427 5859915 Spst6g00647 6 5859427 5859915 ECH