Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Spst6g00629 ATGGGGAAAAAGCGTGTAATGTTGCCCGCGAAGGACGTTGACTTGTCCTCAATTAAGTACGAACGTGAAGTGGTTCAAGCTCCGCATTTGACTGGATTTGTGTTTAGATTTTTTGTGAGGATGCTTGAAGCTCCGCTGATCGGCCCTATCATAATGAATGTTTTGAAGAAGGAAAATAAAATTGATGAGATATTGCAGCACACTGTTATACCTGAGGAACCCATGTTTAAGCCTGAATATCCACCTCAAGAAAAGGAGCCTGGTGTTATTGTCCTTGATGAAGATGGGAGACCTGAAGATCGAGTTGAGTCTGCCTTAATGTGTCTTCCACATTATGATGTTGCTGAATTATGCGAAAATTCATCTGCATCCTTTCGGTACTGGAAAATACGTGACTATGCTCATGCTTATCGATCTAGAAAAGTAACCCCATCCATGATTGCCGAGCGAATAATCTCCATTATAGAGGAAAATGGAAGAAATAAACCTCCTGCACCACTATTGATATCCTTTGAGGCTGCAGAAGTCCGGGAGCAGGCGGCAGCATCTACTAAGAGGTTTGAAGCAGGAAACCCATTATCGATATTGGATGGAATTTTTATGGCCATCAAAGATGACATAGATTGTTATCCTCATCCATCTAAGGGTGCATCAACATGGATGCATGAGGTAAGAACTGTAAAGAAGGATGCAGTCTGTGTTTCAAGACTGCGTTGCTGTGGTGTCATATTTGTAGGGAAGGCAAATATGCACGAGTTTGGAATGGGTACAACAGGAAATAATCCTAATTATGGAACTGCAAGAAATCCTCATGCACCTGATAGGTATACTGGTGGATCTTCTTCAGGTCCAGCTGCAATTGTTGCTTCTGGAATATGTTCGGCTGCATTGGGAACTGATGGTGGAGGTTCAATCCGTATACCTTCTTCCCTTTGTGGTGTGGTGGGATTGAAGACAACATATGGGCGGACAAGCATGGAGGGGTCATTATGTGATTCTGGGACTGTGGAAATTATTGGACCCCTTGCTTCATCAGTGGAGGATGTCATGCTAGTGTATGCGGCAATGTTGGGGGCATCACCTGCAAATAGAATCAGTTTAAGACCGTCACCACCTTGTGTGCCAACTCTGTCATCCCATGATGATTCAAATGCCTTGGGATCTTTAAGAATAGGAAAGTACACCCCGTGGTTTAATGACGTGCATTCAACTGAAATCTCTGATAAATGTGAGGATGCACTTAATCAGCTGTCAAAGGCGCATGGATGTGAAATGATAGAAATTGTTATACCGGAGCTTCTTGAGATGCGAACTGCCCATGTCGTTTCCATTGGCTCTGAATGCTTGTGTTCACTCAATCCTGATTGTGAAGACGGGAAAGGTGTAAAATTGACATATGATACTCGTACAAGTTTGGCACTTTTTCGGTCATTTACAGCAGCAGATTATGTTGCTGCCCAATGTATTAGACGCAGGAATATGTATTACCACATGGAGATTTTTAAGAAAGTGGATGTCATAGTAACTCCGACCACTGGAATGACAGCACCCAGCATACCTCCTAGTTCGCTTAAAAGTGGTGAAACAGATATGCAGACTACAGCTAATCTTATGCAGTTCATTGTTCCAGCAAATCTTCTTGGACTCCCTGCCATTTCTGTCCCGGTTGGTTACGATAAAGAAGGACTTCCAATAGGTTTGCAAATAATGGGTCGACCATGGGCGGAAGCTACTGTTCTGCGGGTAGCCTCTGCAGTGGAGAAACTCTGCGGTGAGTCAAAGAAAAAGCCCGCGTCATACTATGATGTTCTGAAGGCTAACTGA 1824 0.4353 MGKKRVMLPAKDVDLSSIKYEREVVQAPHLTGFVFRFFVRMLEAPLIGPIIMNVLKKENKIDEILQHTVIPEEPMFKPEYPPQEKEPGVIVLDEDGRPEDRVESALMCLPHYDVAELCENSSASFRYWKIRDYAHAYRSRKVTPSMIAERIISIIEENGRNKPPAPLLISFEAAEVREQAAASTKRFEAGNPLSILDGIFMAIKDDIDCYPHPSKGASTWMHEVRTVKKDAVCVSRLRCCGVIFVGKANMHEFGMGTTGNNPNYGTARNPHAPDRYTGGSSSGPAAIVASGICSAALGTDGGGSIRIPSSLCGVVGLKTTYGRTSMEGSLCDSGTVEIIGPLASSVEDVMLVYAAMLGASPANRISLRPSPPCVPTLSSHDDSNALGSLRIGKYTPWFNDVHSTEISDKCEDALNQLSKAHGCEMIEIVIPELLEMRTAHVVSIGSECLCSLNPDCEDGKGVKLTYDTRTSLALFRSFTAADYVAAQCIRRRNMYYHMEIFKKVDVIVTPTTGMTAPSIPPSSLKSGETDMQTTANLMQFIVPANLLGLPAISVPVGYDKEGLPIGLQIMGRPWAEATVLRVASAVEKLCGESKKKPASYYDVLKAN 607
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Spst6g00629 607 ProSitePatterns Amidases signature. 278 309 IPR020556 -
Spst6g00629 607 Gene3D Amidase signature (AS) domain 130 590 IPR036928 -
Spst6g00629 607 SUPERFAMILY Amidase signature (AS) enzymes 109 590 IPR036928 -
Spst6g00629 607 Pfam Amidase 173 580 IPR023631 -
Spst6g00629 607 PANTHER TRANSAMIDASE 120 604 IPR000120 GO:0003824
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Spst6g00629 Spst-Chr6 5701613 5709405 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Spst6g00629 1 607 Acyl Lipid Metabolism Gene Families AT5G64440 67.434 0.0 872
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Spst6g00629 - - gmx:100778732 1142.1
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Spst6g00629 6 5701613 5709405 Spst6g00629 6 5701613 5709405 ECH