Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Spst6g00625 ATGGGTAGTACCAGTAAGAAGAGGAGCTCCGTTCCCGAGGAGCAAACCCTCGCCACCGACGATTCTACCAAACCGCTTAACAAGAAACCAAAGAACACTGCGGCGGCCGGTGATGGTCAGCAACAACCTTCAGTCAAGCCAATGGAGAGGAAAAAGAAGCGCAAAGCCTTGGACAAAGAGCGGCGCCTTACCTCACTCCAACCCGAGCCTGTAGCTACGGAATCCAAACCTGAGTCTAGAACAGGTGGCGACGGTCTCCCGGGATTCCACATTGGCGTGTTCAAGGACCTCGCTGCGGCATCCGAGGCGGCGAGGGAAGCCGCCGCCAAACAAATGGTGAAGGAGTTGAAGGCGGTTCAGAACGCATACGATGAGCGGGAGGAGAAGGAGAATGACGAGGGTGGATTGAAGTTGGAAGCGGAGAAAGACGATGGATTGGATAACTGTGCTCCGTCTGTGAGATACGCTGTTCGTAGGCTCATTCGCGGTGTTTCTTCGTCTAGAGAGTGCGCACGACAAGGCTTTGCTTTAGGTTTAACTGTTTTAGCTGGCACTATACATAACATTAAGGTTGAATCATTCCTTAAACTTGTAATCAATTTGCTGGAAGTAACTTCATCAATGAAGGGTCAGGAAACAAAAGATTGTCTGTTGGGGCGCTTATTTGCTTATGGTGCTCTGGTTCGATCAGGAAGACTTGCAAAAGAGTGGAATATAGATAAAAACACCCCTTACATAAGAGAATTTATCACTGCACTTATATCTACTGCAAATAAAAAGCGGTACTTGCAAGAACCTGCCGTTTCAATAATTTTGGTGTTGGTTCAACAGTTGCCTGTTGAAGCAGTGGTGAATCATATTCTTGAATCTCCTGGGCTACATGAATGGTTTGAAGCTGCTACAGAAGTAGGAAATCCTGATGCTTTGCTCCTTGCTTTAAAAGTCAGGGAGAAGATTTCTATTGACAGCTCCTTATTTGGCAAATTGCTGCCAAATCCATTCAGCTCTGGCCAGTTTTTTTCTGCTGATCACCTGTCCTCCCTAAAAGATGCAGCTGCAGCTTCAAATTCATTAAAGAAGCACAAAAAGAATCGAAAATCTAGTTCTTCTGATGAAGAGATTGCGAGGAATCTTCAGTCTTTTTGTGAAATAATTATTGAAGGTTCTCTTCTCATCTCATCTCATGACCGTAAGCACTTAGCTTTTGATGTTCTGTTTCTTCTTCTCCAAAAGCTACCTGCATCTTTAGTTCCAGTTGTTCTGTCAAACAAAGTTGTTCAGTGCATGGTAGATGTACTATCGATGAAGAACACATGGCTGTATAAAGTAGCACAACATTTTCTTAAACAGTTGTCAGATTGGGTTGGGGATGATGATGTGAGAAGAGTTGCAGTTATAGTGGCTATTCAGAAGCACAGCAATGGAAAATTTGATCGCCTAACACGAACAAAACATGTTAAAGATTTTATGTCACAGTTCCAAACTGAACCTGGTTGCATGCTTTTTATTCAGAACTTAATGAACCTGTTTGTGGATGAAGGTAATACCCAGGAAGAACCTTCAGATCAGAGTCAAACCACAGATGAAAATTCTGAAATAGGATCTATAGAGGATAAGGATTCTCCTAGAACCAATGGGAATTCTGACTTTTTGAAGAGTTGGATTATTGAATCCCTTCCTAGTATTTTAAAATTCTTAAAGCTAGATCTTGAAGAGAAGTTTCGAGTACAGAAAGAAATCATGAAGTTTCTGGCTGTTCAGGGTCTATTCACTGCATCTCTTGGCTCTGAAGTGACTTCGTTTGAGTTACAGGAAAAATTCAGGTGGCCAAAATCCCCAACATCGAACTCTCTTTGCAAGATGTGTATAGACCAGCTGCAATTGTTATTGGCAAATGCTCAAAAAGGGGAGGACCTTCGTCCTTTGGTTAATAGCACTGAGCCAAATGATCTTGGTTCATACTTCATGAAATTCTTTGGCACCTTTTGCAACATTCCTTCAGTTTCCCTCTTCCGGTCTTTAGATGATGTGGATCAAAAGGCAGTTAAAAATTTGCAGGCAGTGGAGGCAAGATTATCCAGAGAGGAAAGGAGTCATGACTGTAGCACTGATGCTAATAGACTGCATGCACTGAGATACATGCTTATCCAGCTGCTTCTGCAAGTACTTCTTTGTCCAGGGGAGTACTCTGAAGCTGCATCTGAACTCATTATTTGTTGTAAGAAGGCCTTTTCTGCTTCTGATCATCCTGAGTCCTCTGGAGATGACGATGAGGTTGATGATGCTCCTGAACTGATGGATGTTCTTGTGGATACATTACTTTCTCTGCTTCCACAATCATCAGCTCCCATGCGATCTTCCATAGAACAGGTATTTAAATTTTTTTCTGTTGATATCACTGATGATGGACTGATGCGGATGTTGCGGGTGATTAAGAAACATTTAAAACCTGCAAGGCATCCGGGTTTAGAAAGTGCAGAAGATGATGAACATGATGAAGATGATGACTTTATCAATATTGAAGATGAAGAAATTGATCAAGCTGAGACAGGTGAAACAGGTGAGAGTGATGGGCAGACAGATGACTCTGAATCAGTAGTTGAGGTGGAAGAGGCTGATGGCCATTCTGAAGCTTCCGATGATTCTGATAGTGGGATGGACGATGATGCTATGTTCCGGATTGATACATATCTTGCTCAGATATTTAAAGAGAAAAAAAATCAAGCTGGAGGTGGTGAAACAGCCCATTCCCAGCTTCCTCAGGTTCTTCTGGTTTACTCAAATTTGGCTCAGGCTTTTGTTAACCCTCATACAGCAGAAGTTAGCGAGCAGCTTGGACAACGTATATGGGGAATCTTACAAAAGCAAATATTTAAAGCAAAGGATTATCCTAGGGGTGATGGAGTCCATTTATCTACTCTTGAATCTCTGTTGGAAAAAAGTTTGAAACTAGCTTCAAAACCATTTAAAAGACAGAAGTCTGCATCTAATCCATCAAAACAATCTGCCGCCTGGAACAGACAGAAAATGGTTTCTTCTCTTGCTCAGACCTCGACCTTCTGGATTTTGAAAATTATTGATTCAAGAAATTTCACTCGGTCTGAATTGGAGAGGATTATTCAAATTTTCCGTGACGTATTGGTTGGGTATTTTGAAAATAAGAAATCGCATATCAAATCTGGATTTTTAAAAGAAATATTTCGAAGACGACCATGGATCGGACATGCTATATTTGGCTTTATTTTGGAGAGGTGTGGAAGTGCCAAGTCAGACTTTCGACGAGTGGAGACTCTTGATTTGGTAATGGAAATAATGAAGTCACTGACATCAGGGAATAGTGATGAACAGAATGCATCGAAAAAGATTCTTAAAAACAGTTTGGATAAACTTTCTCATCTAATGAAAGAATTGTCGACTAATGTTCCAAGTAAACCGGCTAGGCGGACAGAGGTAGAAAAGTTCTGTGTCAAGGCCTTGGATATCTTGTCTAAGCATAACCTCACCAAATATTTTCTTAAAGCTTTGGCACCTGATACTGAAGCTGCACTTGTGGCTCAACTTGGTCAACAATTCATTAGTTTGAAGAAGTTGGAAAATTAA 3600 0.4158 MGSTSKKRSSVPEEQTLATDDSTKPLNKKPKNTAAAGDGQQQPSVKPMERKKKRKALDKERRLTSLQPEPVATESKPESRTGGDGLPGFHIGVFKDLAAASEAAREAAAKQMVKELKAVQNAYDEREEKENDEGGLKLEAEKDDGLDNCAPSVRYAVRRLIRGVSSSRECARQGFALGLTVLAGTIHNIKVESFLKLVINLLEVTSSMKGQETKDCLLGRLFAYGALVRSGRLAKEWNIDKNTPYIREFITALISTANKKRYLQEPAVSIILVLVQQLPVEAVVNHILESPGLHEWFEAATEVGNPDALLLALKVREKISIDSSLFGKLLPNPFSSGQFFSADHLSSLKDAAAASNSLKKHKKNRKSSSSDEEIARNLQSFCEIIIEGSLLISSHDRKHLAFDVLFLLLQKLPASLVPVVLSNKVVQCMVDVLSMKNTWLYKVAQHFLKQLSDWVGDDDVRRVAVIVAIQKHSNGKFDRLTRTKHVKDFMSQFQTEPGCMLFIQNLMNLFVDEGNTQEEPSDQSQTTDENSEIGSIEDKDSPRTNGNSDFLKSWIIESLPSILKFLKLDLEEKFRVQKEIMKFLAVQGLFTASLGSEVTSFELQEKFRWPKSPTSNSLCKMCIDQLQLLLANAQKGEDLRPLVNSTEPNDLGSYFMKFFGTFCNIPSVSLFRSLDDVDQKAVKNLQAVEARLSREERSHDCSTDANRLHALRYMLIQLLLQVLLCPGEYSEAASELIICCKKAFSASDHPESSGDDDEVDDAPELMDVLVDTLLSLLPQSSAPMRSSIEQVFKFFSVDITDDGLMRMLRVIKKHLKPARHPGLESAEDDEHDEDDDFINIEDEEIDQAETGETGESDGQTDDSESVVEVEEADGHSEASDDSDSGMDDDAMFRIDTYLAQIFKEKKNQAGGGETAHSQLPQVLLVYSNLAQAFVNPHTAEVSEQLGQRIWGILQKQIFKAKDYPRGDGVHLSTLESLLEKSLKLASKPFKRQKSASNPSKQSAAWNRQKMVSSLAQTSTFWILKIIDSRNFTRSELERIIQIFRDVLVGYFENKKSHIKSGFLKEIFRRRPWIGHAIFGFILERCGSAKSDFRRVETLDLVMEIMKSLTSGNSDEQNASKKILKNSLDKLSHLMKELSTNVPSKPARRTEVEKFCVKALDILSKHNLTKYFLKALAPDTEAALVAQLGQQFISLKKLEN 1199
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Spst6g00625 1199 Coils Coil 109 129 - -
Spst6g00625 1199 MobiDBLite consensus disorder prediction 869 888 - -
Spst6g00625 1199 MobiDBLite consensus disorder prediction 845 868 - -
Spst6g00625 1199 MobiDBLite consensus disorder prediction 515 531 - -
Spst6g00625 1199 MobiDBLite consensus disorder prediction 845 888 - -
Spst6g00625 1199 SUPERFAMILY ARM repeat 94 1164 IPR016024 -
Spst6g00625 1199 PANTHER MYB-BINDING PROTEIN 1A FAMILY MEMBER 75 1196 IPR007015 GO:0003677|GO:0005730|GO:0006355|GO:0008134
Spst6g00625 1199 MobiDBLite consensus disorder prediction 45 65 - -
Spst6g00625 1199 MobiDBLite consensus disorder prediction 515 545 - -
Spst6g00625 1199 Pfam DNA polymerase phi 155 910 IPR007015 GO:0003677|GO:0005730|GO:0006355|GO:0008134
Spst6g00625 1199 MobiDBLite consensus disorder prediction 1 87 - -
Spst6g00625 1199 MobiDBLite consensus disorder prediction 1 23 - -
Spst6g00625 1199 Coils Coil 1120 1140 - -
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Spst6g00625 K02331 - gmx:100787296 1909.81
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Spst6g00625 6 5655384 5664012 Spst6g00625 6 5655384 5664012 ECH