Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Spst6g00624 ATGGAGATTGAGATCAAGGCAAGCCATATTGCTTATTCTTTCATTGGTTTCCTCCCTTCAGGAGAAGGATATGTGGATCTATTACTTTCTCTTGTGGCTACATTTCAAACTTCCCATCTCACCTCCTTCACCTCTCTTCATTTCCCTTCTGATCAATTTCTCCTCCCGGCTATGGCCGCCGTGCTCCGCTCTCTCCGCCGTCGCGATGTCGCCTCCGCCACCTTCTCTGCCTATCGCTCGGTAGCACCTCCACCTTGTCCATGCTTCCTTATTTTCTTTATTTTTATCATTTCCTGTTGTGAGGGTTGTTCCATGTTACCTTGCTTTTCCGATTTGATCCGTTGTGTGGCAACTGGAGGAATACTTTCTTACTTTCTCATTGTTGTGCAGTTGACAGGAAACAGTAAGCCAGCATATGTAGCTCACAAGTGGTCTAGTCTGTCTAGACCATTCAGTTCAAGGCCTGCTGGAAATGATGTCATTGGTATTGATTTAGGTACCACCAATTCATGTGTTTCCGTCATGGAAGGAAAGAACCCCAAAGTTATTGAAAATTCTGAGGGTGCTCGAACAACACCATCTGTTGTTGCTTTCAACCAGAAAGGGGAGCTGCTTGTTGGTACCCCAGCTAAGCGTCAAGCTGTAACTAACCCGACAAACACTCTCTTTGGTACCAAACGTTTGATTGGTAGACGCTTTGATGATCCTCAAACACAAAAGGAGATGAAAATGGTTCCATTTAAGATTGTTAAGGCTCCAAATGGTGATGCGTGGGTTGAGGCTAATGGGCAGCAGTATTCCCCTAGCCAAATTGGTGCATTTGTTCTCACCAAGATGAAGGAAACTGCAGAAGCTTATCTTGGAAAGTCAGTTTCTAAGGCTGTAATTACTGTACCGGCTTACTTCAATGATGCTCAGAGGCAGGCAACAAAAGATGCTGGTAGAATTGCAGGTCTTGATGTGCAGAGAATTATCAATGAACCCACTGCAGCTGCACTTTCATATGGGATGAACAACAAGGAGGGTCTCATTGCCGTCTTTGACCTTGGAGGTGGAACATTTGATGTATCCATATTAGAAATTTCGAATGGTGTATTTGAGGTGAAAGCAACAAATGGTGACACTTTCTTGGGAGGAGAAGATTTTGACAATGCTTTATTGGATTTTCTGGTGACCGAATTCAAAAGAACCGAGAGTATTGACCTTTCAAAGGACAGGCTTGCACTGCAGAGGCTTCGTGAAGCTGCTGAGAAAGCTAAGATAGAGCTGTCTTCAACATCTCAAACTGAGATCAACCTGCCTTTCATCACTGCTGATACTTCTGGTGCGAAGCATTTGAACATAACATTAACTAGATCTAAGTTTGAGGCTTTGGTAAATCACTTGATCGAAAGGACAAAGGCACCATGTAAAAGCTGTTTGAAGGATGCTAACATCTCTGTCAAGGACGTTGATGAGGTTCTTCTTGTTGGAGGGATGACTAGGGTGCCTAAAGTCCAAGAGGTGGTTTCAGATATCTTTGGAAAGTCTCCCAGTAAAGGAGTAAACCCTGATGAGGCAGTTGCCATGGGGGCGGCAATCCAAGGTGGTATTCTACGTGGAGATGTTAAAGAGCTACTTCTCCTGGACGTAACACCACTTTCTCTGGGCATTGAGACCTTGGGTGGTATCTTTACTAGGTTGATCAACCGCAACACTACTATTCCCACTAAGAAGAGTCAGGTGTTTTCAACGGCAGCTGACAATCAAACTCAGGTAGGTATCAAGGTGTTACAAGGTGAGCGGGAAATGGCTGCAGACAACAAAATGCTAGGAGAATTTGACCTTGTTGGTATTCCACCTGCTCCCAGAGGTCTTCCTCAGATTGAGGTTACGTTTGACATTGATGCCAATGGAATTGTTACCGTCTCTGCCAAAGACAAATCTACTGGGAAAGAACAACAAATCACCATTCGGTCATCTGGCGGACTCTCGGAAGATGAGATTGAAAAGATGGTCAAAGAAGCAGAGTTGCATGCTCAGAAAGACCAGGAGAGAAAGACTCTCATTGACATTAGAAATAGTGCTGATACTACTATCTACAGCATTGAGAAGAGTTTAGGTGAATACAGAGAGAAGATTCCCAGCGAAGTCGCCAAAGAAATTGAGGATGCAATTTCGGATTTGAGAAAGGCGATGTCAGGGGATAATGTTGATGAAATTAAGTCAAAGCTTGACGCTGCAAACAAAGCTGTAAGCAAGATTGGAGAGCACATGTCAGGTGGTTCTAGTGGTGGTTCCTCAGCCGGTGGTTCTCAGGGTGGGGACCAGGCTCCGGAGGCGGAATATGAGGAGGTCAAAAAGTGA 2346 0.4463 MEIEIKASHIAYSFIGFLPSGEGYVDLLLSLVATFQTSHLTSFTSLHFPSDQFLLPAMAAVLRSLRRRDVASATFSAYRSVAPPPCPCFLIFFIFIISCCEGCSMLPCFSDLIRCVATGGILSYFLIVVQLTGNSKPAYVAHKWSSLSRPFSSRPAGNDVIGIDLGTTNSCVSVMEGKNPKVIENSEGARTTPSVVAFNQKGELLVGTPAKRQAVTNPTNTLFGTKRLIGRRFDDPQTQKEMKMVPFKIVKAPNGDAWVEANGQQYSPSQIGAFVLTKMKETAEAYLGKSVSKAVITVPAYFNDAQRQATKDAGRIAGLDVQRIINEPTAAALSYGMNNKEGLIAVFDLGGGTFDVSILEISNGVFEVKATNGDTFLGGEDFDNALLDFLVTEFKRTESIDLSKDRLALQRLREAAEKAKIELSSTSQTEINLPFITADTSGAKHLNITLTRSKFEALVNHLIERTKAPCKSCLKDANISVKDVDEVLLVGGMTRVPKVQEVVSDIFGKSPSKGVNPDEAVAMGAAIQGGILRGDVKELLLLDVTPLSLGIETLGGIFTRLINRNTTIPTKKSQVFSTAADNQTQVGIKVLQGEREMAADNKMLGEFDLVGIPPAPRGLPQIEVTFDIDANGIVTVSAKDKSTGKEQQITIRSSGGLSEDEIEKMVKEAELHAQKDQERKTLIDIRNSADTTIYSIEKSLGEYREKIPSEVAKEIEDAISDLRKAMSGDNVDEIKSKLDAANKAVSKIGEHMSGGSSGGSSAGGSQGGDQAPEAEYEEVKK 781
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Spst6g00624 781 MobiDBLite consensus disorder prediction 745 781 - -
Spst6g00624 781 Hamap Chaperone protein DnaK [dnaK]. 157 779 IPR012725 GO:0005524|GO:0006457|GO:0051082
Spst6g00624 781 Gene3D Actin; Chain A, domain 4 379 466 - -
Spst6g00624 781 ProSitePatterns Heat shock hsp70 proteins family signature 3. 487 501 IPR018181 -
Spst6g00624 781 FunFam Molecular chaperone DnaK 657 757 - -
Spst6g00624 781 FunFam Chaperone protein HscA homolog 343 400 - -
Spst6g00624 781 SUPERFAMILY Actin-like ATPase domain 160 340 IPR043129 -
Spst6g00624 781 ProSitePatterns Heat shock hsp70 proteins family signature 2. 346 359 IPR018181 -
Spst6g00624 781 ProSitePatterns Heat shock hsp70 proteins family signature 1. 163 170 IPR018181 -
Spst6g00624 781 PANTHER HEAT SHOCK PROTEIN 70KDA 160 717 IPR013126 GO:0005524|GO:0140662
Spst6g00624 781 MobiDBLite consensus disorder prediction 753 767 - -
Spst6g00624 781 Coils Coil 402 429 - -
Spst6g00624 781 FunFam Molecular chaperone DnaK 161 342 - -
Spst6g00624 781 Gene3D - 336 516 - -
Spst6g00624 781 FunFam Chaperone protein DnaK HSP70 528 711 - -
Spst6g00624 781 SUPERFAMILY Heat shock protein 70kD (HSP70), peptide-binding domain 534 690 IPR029047 -
Spst6g00624 781 CDD HSPA9-like_NBD 157 532 - -
Spst6g00624 781 NCBIfam molecular chaperone DnaK 160 752 IPR012725 GO:0005524|GO:0006457|GO:0051082
Spst6g00624 781 Gene3D - 161 529 - -
Spst6g00624 781 PRINTS 70kDa heat shock protein signature 515 535 - -
Spst6g00624 781 PRINTS 70kDa heat shock protein signature 159 172 - -
Spst6g00624 781 PRINTS 70kDa heat shock protein signature 187 199 - -
Spst6g00624 781 PRINTS 70kDa heat shock protein signature 352 362 - -
Spst6g00624 781 PRINTS 70kDa heat shock protein signature 484 500 - -
Spst6g00624 781 PRINTS 70kDa heat shock protein signature 538 557 - -
Spst6g00624 781 PRINTS 70kDa heat shock protein signature 294 314 - -
Spst6g00624 781 PRINTS 70kDa heat shock protein signature 210 218 - -
Spst6g00624 781 PRINTS 70kDa heat shock protein signature 619 635 - -
Spst6g00624 781 FunFam Heat shock protein 9 223 274 - -
Spst6g00624 781 Gene3D Substrate Binding Domain Of DNAk; Chain A, domain 1 532 656 IPR029047 -
Spst6g00624 781 FunFam Molecular chaperone DnaK 379 466 - -
Spst6g00624 781 Gene3D - 657 754 IPR029048 -
Spst6g00624 781 Pfam Hsp70 protein 160 752 IPR013126 GO:0005524|GO:0140662
Spst6g00624 781 SUPERFAMILY Actin-like ATPase domain 341 532 IPR043129 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Spst6g00624 Spst-Chr6 5646300 5650571 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Spst6g00624 160 764 Miscellaneous Gene Families AT5G42020 50.713 0.0 584
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Spst6g00624 K04043 - gmx:100804559 1232.62
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Spst6g00624 6 5646300 5650571 Spst6g00624 6 5646300 5650571 ECH
Spst3g00445 3 7588590 7591742 Spst6g00624 6 5646300 5650571 PCT