Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Spst6g00541 ATGGAAAGAAGAGAAAAAGGTGAGGAAAGGGAAGGGTTAATGGTGGAAAAGTTGAAAGGAGGGATTGTTGTGGGGAAAAGAGGAGGCCCTTCAACTCCCCCACCCATATGGAGACTTGAGTTTCCCTCTCAGCAAAATAAGAATAATGGTAACTACAAAAGCAAAAATAGAAACCAGGTTCAAGAGTTCCTCAACTTTCCCACCTCAACAACACTCTCTGCCAGAAAACTCTGTGCCAAACTCTGGCAAATTCAGCCCCACCAACAGGCCCCACTTCCCAAAATGAACAAGCCTCCACTCACCCGCCGCCACCGTAGGGACACACTTCTCAAGGTTTCGAATCTTAAACATATGTCTCAGCCTCCTCATAGTCACATGCCAGCATCCGTTACGGGCTTGACAAGACATGTTCGAACATCACTGGTCCAACACCATAGATCAGCTAGAAATGGTCGCACTAAACAGCCTGTATCCCCTCCTTGTCACAGTAGTTCAATGCAAGTTGCACAGTATAATCATCCTCTAAGATACTTCAAGGGTTGGATTACAGAGTCAAGTCGCAACCCTAAAACATCCAGAGAGTTACTCAAGGTACTCAACCATATCTGGTGTCTTGAAGAACAGCATGCGTCAAACCTATCAGTAGTGAAAGCCCTAAAAAGGGAACTAGATCTTTCTCGAGCACAGGTTAAAGAGTTACAACAAGAAAATCAATTGAATGAGCATGAAATGGAGAACCTATTGAAGCAAATAACTGAGGAGAAGCTTGTCAGGAAGAACAAAGAGCATGATAAAATTAAAGCTTCAATTCAATCTGTCATGCAAGAGATGGAAGATGAAAGGAGGTTAAGAAAGCATTCAGAAAGCCTGCATCGGAGGCTGGCTAGGGAGCTTTCTGAAGTGAAGTCTTCATTCAATGGTTCTCTGATAGATCTTGAAAAAGAGAGAAAAACACGGATCCTTTTAGAGAATTTGTGTGATGATTTTGCCAAAGGCATAAGAGATTATGAGTATGAGGTACGTTCTCTTATGCATAATAATTGTGAGCAGGGTCAAGCTCAGGTTAAAGGAGATAGCTTTGATAGGCTAATTCTTCATCTATCAGAAGCTTGGCTTGATGAGCGCAAGCAAATGAAGTTAGTTCAAGCTGCCCATGATCTCCCAGAAATTGATTCATCAATTGTTGACAAGTTAGGTGTTGACATTGAAACATTTCTTCATGCAAAAAGATCTGTTAACTTGAGAAGATATGGTAACTCCTCCACAAAGGAGACAAAGGAAATTTACCCTTGCCTACATTCACTGGATTCCTTTCCAGTGAAGGAGGCCATAAGGGCACCTCTGAATGTGGCTGAAGAAGACTCCATTGGTGCCTACATTTTAGAGCATAAAAGAACTTCAGACAAAGGACTGGACAAACTTGGCTCCAAAATGAACAACAACAATACTGCAGAGGTCCATAGAGAAAAGAAAGGAAGGCACAATTCTCTTAGGAAACAAGTTCAGTCCAAGGAAATCATTGAGGACTGCTGTGAGTTGCAAACAAGAATGATGAAGAACGTGTCATGTGATGAAAATGAGAGTTGGTTTGTTGAGAGGAAATCAAGTGAAATTGGAGGGGACAGCACAATGCTATTTAATACCCCTGGGGCATCAACTGTGTGTGAGGCAACACAAGGTCCACCAAAAAGTAATGCATTATTGTGGACAAAGAGAATGAATTCAAGTTATGTAGTTAGAAACAGTTCCTTGTCTTCTGAAGGCGATGATAATAAGGTTTATCCAGAGAGTATATTCAGGGAAGACGTACTTGTTCACTCTGCACGTACTGGTAATGGCAGTCCAGTAAAACAGTGGAAATCTACATTGATTGTCCCAGATTTTGACAAGTCTGAGTCTTGTTCCAAATTGCCTATTAAGGACAACGACACATTGATGGCAAAACTGCTTGAAGCAAGGATGGAGAGGCAGAAATCCCGCCGTAGAGCTAGCATTAGCAAAATCTCATTTCCTTCTGCCAGACAAGTTTGTGATGAGAAACATAGGAATGTCAGTAGTTGCAACGGTATCGAACTCTGA 2079 0.4194 MERREKGEEREGLMVEKLKGGIVVGKRGGPSTPPPIWRLEFPSQQNKNNGNYKSKNRNQVQEFLNFPTSTTLSARKLCAKLWQIQPHQQAPLPKMNKPPLTRRHRRDTLLKVSNLKHMSQPPHSHMPASVTGLTRHVRTSLVQHHRSARNGRTKQPVSPPCHSSSMQVAQYNHPLRYFKGWITESSRNPKTSRELLKVLNHIWCLEEQHASNLSVVKALKRELDLSRAQVKELQQENQLNEHEMENLLKQITEEKLVRKNKEHDKIKASIQSVMQEMEDERRLRKHSESLHRRLARELSEVKSSFNGSLIDLEKERKTRILLENLCDDFAKGIRDYEYEVRSLMHNNCEQGQAQVKGDSFDRLILHLSEAWLDERKQMKLVQAAHDLPEIDSSIVDKLGVDIETFLHAKRSVNLRRYGNSSTKETKEIYPCLHSLDSFPVKEAIRAPLNVAEEDSIGAYILEHKRTSDKGLDKLGSKMNNNNTAEVHREKKGRHNSLRKQVQSKEIIEDCCELQTRMMKNVSCDENESWFVERKSSEIGGDSTMLFNTPGASTVCEATQGPPKSNALLWTKRMNSSYVVRNSSLSSEGDDNKVYPESIFREDVLVHSARTGNGSPVKQWKSTLIVPDFDKSESCSKLPIKDNDTLMAKLLEARMERQKSRRRASISKISFPSARQVCDEKHRNVSSCNGIEL 692
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Spst6g00541 692 PANTHER GB|AAF24581.1 6 662 IPR043424 -
Spst6g00541 692 MobiDBLite consensus disorder prediction 470 499 - -
Spst6g00541 692 Coils Coil 216 250 - -
Spst6g00541 692 MobiDBLite consensus disorder prediction 144 165 - -
Spst6g00541 692 MobiDBLite consensus disorder prediction 483 499 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Spst6g00541 Spst-Chr6 4961944 4965414 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Spst6g00541 - - pvu:PHAVU_006G109400g 1126.31
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Spst6g00541 6 4961944 4965414 Spst4g01910 4 59757290 59760726 PCT