Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Spst6g00528 ATGGCAACGTGGGGTGCACATTCAATGCCGTTATCTCATGGGGAAGGCACAGGCACTCCCCATGTATCTATAAAATCAAGTCTTACGGTTAGAGGTGATTTAAGGTTTCTCAGAACAAGAGAGTTGTTTAAATATGCTCCTCGTGTGGTAGTGCTCAGAGTGTTTTCCACCGCCAGAAAGCCAACACGCTTGGGCTTGTTAAGACCTTATTGTAGTTTGAGGAGGCAACACTACCAAGGGAAAGATTATTCTTCTGCCACCACTACACAAATACCGCGGAAGCAGATATTCAAATTTGTGGCAGAACGAATGCTTGTTGTTCTCAAAGATTGGAATTGGAATAATTTACGCATTATGGCAGTATCTGGCATATTGGTATCCATGCTAATGATCATTCCATCAGCTGATGCTGTTGATGCTCTTAAAACTTGTACTTGCTTACTGAAGGATTGCAGGTTAGAACTGGCTAAGTGTCTTTCAAACCCATCTTGTGCTGCCAATATTGCTTGTCTCCAAACTTGCAACAATCGACCTGATGAGACTGAATGCCAAATTAAATGTGGGGACCTGTTTGAAAACAGTGTGGTTGATGAATTCAATGAGTGTGCAGTCTCAAGGAAGAAATGCGTACCTAAGAAATCTGATGTGGGAGAATTTCCTGCTCCAAATCCTGGTGTCCTTGTTAATAGCTTCAACATTGCGGATTTCAGTGGCAAGTGGTTCATCACTAGTGGCTTAAATCCTACCTTTGATACCTTTGACTGCCAATTACATGAATTTCACACAGAATCCAACAAGCTTGTGGGTAATTTGTCATGGAGGGTACGGACTCCAGATGCTGGATTTCTTACTAGGTCCGCTGTGCAGAAATTTGTGCAAGATCCTTCCTATCCTGGAATCCTCTACAATCATGACAACGAGTACCTTCACTATCAAGATGACTGGTATATTTTGTCATCAAAGATTGAGAATAAACCAGATGACTACGTATTTGTATACTACCGAGGCAGAAACGATGCATGGGATGGTTATGGAGGTGCTGTTGTGTACACAAGAAGTGCAGTTTTGCCAGAATCTATAGTTCCTGAACTTGAAAGAGCAGCTAAGAGTGTGGGAAGAGACTTTAGCAAGTTCATCAAGACAGATAACACATGTGGACCAGAGCCTTCCCTGGTGGAAAGGTTGGAAAAAAAGGTAGAGGAAGGAGAGGAGACCATTGTGAGGGAAGTTGAACAGCTAGAAGAAGAGGTGGGGAAAGAGGAGGTCACTTTGTTTCAGAAGTTGGCTGAAGGTTTCAAAATATTTCAAGAAGATGAGGAAAATTTCTTGAAAGGGCTTTCAAAAGAAGAAATGGAGATACTTAATGGGCTCAAAATGGAAGCCAGTGAAGTAGGAAAGCTCTTTGGAAATGCCTTGCCCATAAGGAAACTGAGATGA 1437 0.4224 MATWGAHSMPLSHGEGTGTPHVSIKSSLTVRGDLRFLRTRELFKYAPRVVVLRVFSTARKPTRLGLLRPYCSLRRQHYQGKDYSSATTTQIPRKQIFKFVAERMLVVLKDWNWNNLRIMAVSGILVSMLMIIPSADAVDALKTCTCLLKDCRLELAKCLSNPSCAANIACLQTCNNRPDETECQIKCGDLFENSVVDEFNECAVSRKKCVPKKSDVGEFPAPNPGVLVNSFNIADFSGKWFITSGLNPTFDTFDCQLHEFHTESNKLVGNLSWRVRTPDAGFLTRSAVQKFVQDPSYPGILYNHDNEYLHYQDDWYILSSKIENKPDDYVFVYYRGRNDAWDGYGGAVVYTRSAVLPESIVPELERAAKSVGRDFSKFIKTDNTCGPEPSLVERLEKKVEEGEETIVREVEQLEEEVGKEEVTLFQKLAEGFKIFQEDEENFLKGLSKEEMEILNGLKMEASEVGKLFGNALPIRKLR 478
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Spst6g00528 478 Pfam VDE lipocalin domain 143 383 IPR010788 GO:0046422
Spst6g00528 478 SUPERFAMILY Lipocalins 220 389 IPR012674 -
Spst6g00528 478 Gene3D - 214 395 IPR012674 -
Spst6g00528 478 Coils Coil 392 416 - -
Spst6g00528 478 PANTHER VIOLAXANTHIN DE-EPOXIDASE, CHLOROPLASTIC-RELATED 85 466 IPR044682 GO:0010028|GO:0046422
Spst6g00528 478 CDD lipocalin_VDE 215 389 - -
Spst6g00528 478 ProSitePatterns Lipocalin signature. 232 243 IPR022272 -
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Spst6g00528 K09839 - gmx:100778118 807.364
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Spst6g00528 6 4875154 4878096 Spst6g00528 6 4875154 4878096 ECH