Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Spst6g00512 ATGGGTTCTGTGGCCTATTCTTGTTTTGCTCCTCTTAAGCATCACCACCTTCTTCTTCTTGGTTTCTTCTTGGTCCTCCTTCTGCAAACGGTTGAGGTTGGATCCAGCACCCTAAACTACACAACTGATAGGAAAGTCAACAGCTTGAGGCTCCAAAGGATACAGAGACACTTGGACAACATCAACAAGACCCCTGTCCTCACCATACAGAGTCCAGACGGTGATCTCATAGATTGTGTCCACAAAAGAAAGCAACCCGCTTTAGATCACCCCCTTTTGAAGAATCACAAGATCCAGAGAGTACCAAGTGAAATGCCAAAGGGTATGAAGGTGAAGGGTGGAATGGGGATGGGAATGCAAAAATGGCATCAAAATGGGACCTTCTGTCCAAAAGGAACTGTTCCGATACGGCGGAGCACCGTGCATGACGTGTTGAGAGCAAAGTCTTTGTTTGACTTTGGGAAGAAACGACGACGCTTTTCTCTAGCACGCAGCGACGCCCCCGATGTAGTTACGGGCAATGGTCATGAGCATGCAATCGCATACACTGGATCAGCGGAGGAGGTGTACGGGGCAAAGGCAACGATAAATGTGTGGGAACCTTCAATCCAAGTAGTCAACGAATTCAGTCTCTCTCAGATTTGGATTCTTTCTGGTTCCTTTGATGGCTCAGATCTCAACAGCATTGAAGCTGGATGGCAGGTCAGTCCGGAGCTTTATGGTGACACCAGACCCAGATTATTCACTTACTGGACGAGTGACTCGTATCAAACAACCGGATGCTATAACCTTCTTTGTGCTGGTTTTGTGCAAACAAACAGCAGAATAGCCATTGGAGCTGCCATTTCCCCCATCTCATCATGTGATGCTAACCAATACGACATCACCATCCTCATTTGGAAGGACCCAAAAATAGGGAATTGGTGGATGAGTTTTGGTGATGGGACGTTGGTGGGGTATTGGCCAGAAGAGTTATTCACACACTTGGCCGCACATGCGACCATGGTGGAGTGGGGTGGCGAAGTGGTGAACACTCGTGCCAATGGGCAACACACCTCCACCCAAATGGGATCTGGGCACTTTGCTGGAGATGGTTTTGGAAAAGCAAGCTATTTTCGTAACCTTGAGATTGTAGACACCGACAATAGTCTTAGCTCGGTGCACAACATCTTAACCCTAGCTGAGAACACCAATTGTTATGACATCAAGAGCTCCTATAGCAACGAATGGGGCACATACTTTTACTATGGTGGCCCAGGCAACAATCCTCAGTGCCCATGA 1281 0.4778 MGSVAYSCFAPLKHHHLLLLGFFLVLLLQTVEVGSSTLNYTTDRKVNSLRLQRIQRHLDNINKTPVLTIQSPDGDLIDCVHKRKQPALDHPLLKNHKIQRVPSEMPKGMKVKGGMGMGMQKWHQNGTFCPKGTVPIRRSTVHDVLRAKSLFDFGKKRRRFSLARSDAPDVVTGNGHEHAIAYTGSAEEVYGAKATINVWEPSIQVVNEFSLSQIWILSGSFDGSDLNSIEAGWQVSPELYGDTRPRLFTYWTSDSYQTTGCYNLLCAGFVQTNSRIAIGAAISPISSCDANQYDITILIWKDPKIGNWWMSFGDGTLVGYWPEELFTHLAAHATMVEWGGEVVNTRANGQHTSTQMGSGHFAGDGFGKASYFRNLEIVDTDNSLSSVHNILTLAENTNCYDIKSSYSNEWGTYFYYGGPGNNPQCP 426
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Spst6g00512 426 Gene3D - 200 315 - -
Spst6g00512 426 Pfam Neprosin activation peptide 68 182 IPR025521 -
Spst6g00512 426 PANTHER PROTEIN, PUTATIVE (DUF239)-RELATED-RELATED 54 422 - -
Spst6g00512 426 FunFam Putative carboxyl-terminal proteinase 198 318 - -
Spst6g00512 426 Pfam Neprosin 207 419 IPR004314 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Spst6g00512 Spst-Chr6 4703794 4706444 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Spst6g00512 - - gmx:100789333 736.487
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Spst6g00512 6 4703794 4706444 Spst6g00512 6 4703794 4706444 ECH