Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Spst6g00243 ATGTCAATCCAAACTCCTGGGACCCACACAGCTCTTTCTGACTCGTCAACCCCACCCTTACACCTTTCGCCGTCAATAACCGTTACGGTGGTAACTTTACTGGGCAGTGTTGATATTGGTGATGCTGGTGTTTTCCCCGTAAAGTGGTGGTGTTGTGCTGGTGGTGGTTTTCTGAGGCAAAGGGTATCTGCAATTGGTAGTGTTAGCCATGGTTATGGGCAAAAACTTCATCCTTTTGATCCTCCTTTGTTGGGTTTGAGGGGTGTTGTGGAAATGATGTACGGTGGAAGAAGGGGTGGTGGGGTGGCATCTTTATCTGTTTTGTTGAACCAAATCAAGAGGGGTGTATCAACTTCAACTGGGGGTGGTGGTTTCAGCAATGGTAATGGAAGAGAAGATTCGATATCATTCTCTGAAGCAAAGAAGCTCATGAGGTTGGTGAATGTGGAGTCCCTCAAGATGAAGCTTGGTGTGGAAGGGAAGGAAGTTATTTGCTATTCTGAGCTTCTTGAGGCGTGTGAGAGCATGGGAATTGCTAGGAGTCCTGAGGAGGCTGCAGCATTTGCCAGAGTTCTTGATGAGGCTGGGGTTGTTCTCCTCTTCCGGGACAAAGTGTATTTGCATCCTGATAAGGTGGTGGATCTGGTTCGAAGAGCCGTTCCTCTGGCACTGATGGCTGACAACGATCCTACGAGGGAGGAGTTGAAGATCCTGCAGGAGAAGAAAGAGGAAATTGATGTGCTGGCGCATAAGCAGGTGCGGCGCATCCTCTGGTCTGGACTAGGATTCAGCATAGTTACAGTTAGTCTCTTCTTCAGGCTAACATTCTGGGAATTTTCATGGGATGTGATGGAACCAATTGCATTTTTTACCACAACCACAGGGTTGGTCATAGGCTATGCATACTTTTTGTTTACATCAAGAGACCCTACATACCAAGACTTGATGAAGAGGCTGTTTCTTTCAAGGCAGAAGAAGCTTTTCAAGAGCCATAATTTTGACATAGAGAGATTCAAGGAGCTCCAGTGCAAGTGCAAAACACCTTTGCATGCCAGTGCTGTTTTAAAAAATCGCATAGGGGTGGAAGTGGATCTTGAAGACGCTTTACATAGAGATTAA 1119 0.4638 MSIQTPGTHTALSDSSTPPLHLSPSITVTVVTLLGSVDIGDAGVFPVKWWCCAGGGFLRQRVSAIGSVSHGYGQKLHPFDPPLLGLRGVVEMMYGGRRGGGVASLSVLLNQIKRGVSTSTGGGGFSNGNGREDSISFSEAKKLMRLVNVESLKMKLGVEGKEVICYSELLEACESMGIARSPEEAAAFARVLDEAGVVLLFRDKVYLHPDKVVDLVRRAVPLALMADNDPTREELKILQEKKEEIDVLAHKQVRRILWSGLGFSIVTVSLFFRLTFWEFSWDVMEPIAFFTTTTGLVIGYAYFLFTSRDPTYQDLMKRLFLSRQKKLFKSHNFDIERFKELQCKCKTPLHASAVLKNRIGVEVDLEDALHRD 372
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Spst6g00243 372 PANTHER CALCIUM UNIPORTER PROTEIN, MITOCHONDRIAL 121 347 IPR039055 GO:0051560
Spst6g00243 372 MobiDBLite consensus disorder prediction 1 20 - -
Spst6g00243 372 Pfam Mitochondrial calcium uniporter 183 341 IPR006769 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Spst6g00243 Spst-Chr6 2510480 2512945 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Spst6g00243 K20858 - gmx:100784357 563.148
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Spst6g00243 6 2510480 2512945 Spst6g00243 6 2510480 2512945 ECH
Spst6g00243 6 2510480 2512945 Spst8g00266 8 2327306 2329570 PCT