Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Spst6g00015 ATGGCTGCCCCCAACAACCACCACCCGAACCCCAACACCCACCCTCCTCCTCCCTTCGACATGCACTCCTTCTTCAACCCTCCACCCCCTTCCTCCAACCCTAACCCTAACCCTTCATCCTCCTATCCTCCGCCCTTCTCCCCCGCCGCGCCCTTCCATTTCCCCGCCTTCGACCTCCCTCTCCACCACCACCGCTCCCTCTCCTTCCCCACCCAGCCCATCCCCCCGCCCTCCAACCCCAACGCCGGCGCCCGCCTCATGGCCCTCCTCAGCAACCCCTCTCCGCCGCCCCCGACTTCCCGCCCCCCGCATCCACCCCCTCCGCCCGGCAAGGTCCCCAAGGGAAGACACCTCGCCGGGGAGCGCGTCGCCTACGACGTCGAGGTCCGCCAGCCCGGCGAGGTCCAGCCCCAGCTCGAGGTCGCTCCGATAACGAAATACGTGTCGGACCCTAACCCGGTTCTGGGGAGGCAGATTGCGGTGAATAAGTCGTATATATGCTATGGGCTGAAACAGGGGAACATCAGGGTGCTTAATATTCACACTGCTGTCAGGTCTCTCCTCAGAGGCCATACTCAGAGGGTCACAGACCTGGCGTTTTTTGCTGAAGATGTTCATCTCTTGGCTAGTGTTGGCACAGATGGCCGCGTCTACGTGTGGAAGATCTCTGAAGGTCCAGATGATGAAGATAAGCCTCAAATTACAGCCAATATTGTTATTGCTATTCAAATAGTAGGGGAGGAGAAAGTTGAACATCCTCAAATTTGCTGGCACTGTCACAAACAAGAGATTTTGATTGTTGGTATGGGAAAACATGTTTTGAGAATTGACACCACAAAAGTTGGAAATGGTGAAGCGTTTGTGGCAGAGGATCCTCCTCTGAGATGTCCTGTTGACAAACTCATTGATGGGATTCAGCTGGTAGGAACACATGATGGGGAGGTGACTGATTTATCAATGTGCCAATGGATGACCAATCGATTGGTATCTGCATCACAGGATGGCACGATTAAGATCTGGGAAGATAGAAAGACACAGCCACTAGCAGTTTTGAGACCACACGATGGTCATCCAGTTTTTTCTGCTACATTTTTTACTGCTCCTCACCAGCCTGATCATATTGTCCTTATCACAGCAGGACCACAAAATCGGGAGGTGAAGCTATGGGTCTCGGCGAGTGAAGAAGGTTGGCTGCTCCCAAGTGACACTGAATCATGGAAATGCACTCAGACATTGGAGTTGAAGAGTTCGGCTCAACCATCTAAGGATGCGTTCTTTAATCAAGTTGCAGCACTGTCTCATGCAGGTCTGCTTTTACTTGCAAATGCCCAGAGGAATGCTATCTATGCTGTGCATTTAGAGTATGGTCCTAATCCAGAATCAACTCGCATGGATTATATAGCTGAGTTTACTGTGACCATGCCCATTCTGAGTTTTACTGGGACAAGTGATATATTACCTCATGGTGAACATATTGTTCAGGTTTATTGTGTTCAGACACAAGCTATTCAGCAGTATGCTTTGGATTTAGCCCAGTGTTTGCCTCCACCGTTGGATAATGTGGGACTAGAGAAATCAGATTCCAGTGTTTCCCGTGATGCAATTACTGTTGAAGGATTCCACACTTTTGACTCTTCTGTTCCCAAAACAATGTTACAAGCAAGTAGTACTGAAAATGGACTTGTGGCTAGATACCCTTTAAGCTCTGGTCATGTTGAGGCACCTATTACATGTTCAAATACTGAAGCTGTATTAGCTCCTTCTAGTAGTGATCCTGATATCGTTTGTGCTCCATCTCCACCTCTTCCTTTGAGCCCAAGGCTATCCAGGAAAGTCTCTGATATCAGGAGTCCACAGTCAAACTTGAGTGATCATGTTGGGGACCATCCTGTTAATAATTATTCCATAGACAGACAAATGGATACCATTCATAGAAACTTGTCTGACCCATTGAATAGTGATTCAAAGAATGATGAGAATAAAGTGAAGCAGGATCACATTTCTAGTGTACTTAATCCTTCTGTCATGTTTAAGCAACCAACCCATCTAATTACACCATCTGAGATCACAAAAACTGGTTCCTCCTCTGAGAATAATATAACTGATAGGAAGAGTGAGGGAGAAGCAAAGATCCAGGATGTGGTTGACGTGGGTAATGCTGAAGTGGAAGTGAAGGTGGTGGGTGAGACAAGATCTAATCAAATTGATGAGTTTGGTCGGCAAGGGTCACAACAAAATCCAGTTTTTGATAGTAAAGAAAAAGTATTTTGCTCCCAGGCTTCAGATCTTGGTATTGAGATGGTTCGAGAAGGCTGTGTGATAGCTGGGGAGACATTACTTACAGAGGAACCTGGCCAAATTGATTCAACTGGAGGGGACTCACTAGGTCAACCTCCTGATATTGGTGAGGATGGACTCCAAGACATGGCAAAAAATGCCCATGAAAAGGTTTCTGACTCATCTACATCTGTGACCTTGCCACCATTTCCTATGCCTAATGCAAAAGGGAAAAGACAGAAGGGTAAAAATTCTCAAGCATCAGGCCCGTCTTTCTCATCTCCAAGTGTATGCAATTCAACTGATTCATCCAATGATCCAAGTGGAAATTCTAGCCTCCCATCTGCTGAAAATGCTTTCCCCCAAATTCTGGCAATGCAAGAATCACTCAATCAGTTATTGACAATGCAAAAAGAGATGCAAAAGCAAATGACAATGATGGTTGCTGTTCCAGTGACAAAAGAAGGTAGAAGGCTTGAGGCTGCCCTAGGGAGACACATGGAAAAAGCTGTAAAGGCCAACAGTGATGCTTTATGGGCTCGAATCCAGGAGGAGAATGCAAGAAATGAAAAGTTTTTACGAGACCGTACCCAGCATATTACGGGTTTGATCAGTAACTTTATGAATAAAGATCTACCCGCAATACTGGAGAAAACAGTAAAAAAGGAAATGGCTTCGGTTGGGCAAGCAGTAGCACGTGCAATGACTCCTGCTGTGGAGAAAATAATATCTTCTGCTATCGTGGAATCCTTTCAGAGAGGAGTGGGTGATAAGGCAGTCAACCAACTTGATAAATCAGTTAGTTCAAAAGTTGAAGCTACTGTAGCTAGGCAAATCCAAGCACAATTTCAGACAACTGGCAAACAGGTGCTTCAGGAGGCACTCAAATCCAGTTTTGAGACATCAGCGGTTCCTGCATTTGAAATGTCGTGTAAAGCCATGTTTGAGCAAGTGGATGCTACATTTCAGAAAGGCATGGCTGAACATTCAACTGCTGTGCAGCAACGTCTTGAATCTGCACCCACTTCTTTGGCAATGACACTAAGGGATTCTATTAATTCAGCGTCATCAATTACTCAAACTTTGAATAGAGAAGTTCTTGAGGGCCAGAGAAAGCTAGTAGCACTCGCAGCTACAAGAACAAACTCGGGCACGTTAAATCCTTTGCCCGTCCAGTTGAACAACGGTCCTTTACTTCATGAAAAGGTTGAGGTTCCCCTGGATCCCACACAGGAGCTCGCAAGGTTGATTTCTGAACGGAAATATGAGGAGGCTTTCATTGGAGCTTTACATAGAAGTGATGTATCCATTGTATCTTGGTTATGTTCTCAGGTTGATCTACATCGACTCTTATCGATGGTTCCTCTTCCTCTAAGCCAAGGTGTACTGCTTTCACTTCTGCAGCAACTGGCCTGTGACATAAACAACGATACACCGCGAAAGATTGCATGGTTGACAGATGTAGCGTCTGCCATAAACCCATCGGACCCGGTGATTGCGATGCACACACGACCCATCTTCGAGCAAGTGTACCAGATACTGAATCATCAACGTAGCTTGCCTACGATGACTGGAACTGATCTCTCAAGTATCCGTCTTTTATTGCATGTCGTCAACTCCATGCTTATGACATGTAAATGA 3918 0.464 MAAPNNHHPNPNTHPPPPFDMHSFFNPPPPSSNPNPNPSSSYPPPFSPAAPFHFPAFDLPLHHHRSLSFPTQPIPPPSNPNAGARLMALLSNPSPPPPTSRPPHPPPPPGKVPKGRHLAGERVAYDVEVRQPGEVQPQLEVAPITKYVSDPNPVLGRQIAVNKSYICYGLKQGNIRVLNIHTAVRSLLRGHTQRVTDLAFFAEDVHLLASVGTDGRVYVWKISEGPDDEDKPQITANIVIAIQIVGEEKVEHPQICWHCHKQEILIVGMGKHVLRIDTTKVGNGEAFVAEDPPLRCPVDKLIDGIQLVGTHDGEVTDLSMCQWMTNRLVSASQDGTIKIWEDRKTQPLAVLRPHDGHPVFSATFFTAPHQPDHIVLITAGPQNREVKLWVSASEEGWLLPSDTESWKCTQTLELKSSAQPSKDAFFNQVAALSHAGLLLLANAQRNAIYAVHLEYGPNPESTRMDYIAEFTVTMPILSFTGTSDILPHGEHIVQVYCVQTQAIQQYALDLAQCLPPPLDNVGLEKSDSSVSRDAITVEGFHTFDSSVPKTMLQASSTENGLVARYPLSSGHVEAPITCSNTEAVLAPSSSDPDIVCAPSPPLPLSPRLSRKVSDIRSPQSNLSDHVGDHPVNNYSIDRQMDTIHRNLSDPLNSDSKNDENKVKQDHISSVLNPSVMFKQPTHLITPSEITKTGSSSENNITDRKSEGEAKIQDVVDVGNAEVEVKVVGETRSNQIDEFGRQGSQQNPVFDSKEKVFCSQASDLGIEMVREGCVIAGETLLTEEPGQIDSTGGDSLGQPPDIGEDGLQDMAKNAHEKVSDSSTSVTLPPFPMPNAKGKRQKGKNSQASGPSFSSPSVCNSTDSSNDPSGNSSLPSAENAFPQILAMQESLNQLLTMQKEMQKQMTMMVAVPVTKEGRRLEAALGRHMEKAVKANSDALWARIQEENARNEKFLRDRTQHITGLISNFMNKDLPAILEKTVKKEMASVGQAVARAMTPAVEKIISSAIVESFQRGVGDKAVNQLDKSVSSKVEATVARQIQAQFQTTGKQVLQEALKSSFETSAVPAFEMSCKAMFEQVDATFQKGMAEHSTAVQQRLESAPTSLAMTLRDSINSASSITQTLNREVLEGQRKLVALAATRTNSGTLNPLPVQLNNGPLLHEKVEVPLDPTQELARLISERKYEEAFIGALHRSDVSIVSWLCSQVDLHRLLSMVPLPLSQGVLLSLLQQLACDINNDTPRKIAWLTDVASAINPSDPVIAMHTRPIFEQVYQILNHQRSLPTMTGTDLSSIRLLLHVVNSMLMTCK 1305
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Spst6g00015 1305 FunFam enhancer of mRNA-decapping protein 4 140 454 - -
Spst6g00015 1305 ProSiteProfiles Trp-Asp (WD) repeats circular profile. 308 341 - -
Spst6g00015 1305 MobiDBLite consensus disorder prediction 1 49 - -
Spst6g00015 1305 ProSiteProfiles Trp-Asp (WD) repeats circular profile. 188 225 - -
Spst6g00015 1305 Gene3D - 143 495 IPR015943 GO:0005515
Spst6g00015 1305 Pfam WD40 region of Ge1, enhancer of mRNA-decapping protein 141 453 IPR032401 -
Spst6g00015 1305 MobiDBLite consensus disorder prediction 9 49 - -
Spst6g00015 1305 MobiDBLite consensus disorder prediction 67 116 - -
Spst6g00015 1305 MobiDBLite consensus disorder prediction 91 113 - -
Spst6g00015 1305 FunFam Enhancer of mRNA-decapping protein 4 1217 1303 - -
Spst6g00015 1305 ProSiteProfiles Trp-Asp (WD) repeats profile. 188 230 IPR001680 GO:0005515
Spst6g00015 1305 SUPERFAMILY WD40 repeat-like 158 417 IPR036322 GO:0005515
Spst6g00015 1305 SMART WD40_4 344 390 IPR001680 GO:0005515
Spst6g00015 1305 SMART WD40_4 304 341 IPR001680 GO:0005515
Spst6g00015 1305 SMART WD40_4 181 221 IPR001680 GO:0005515
Spst6g00015 1305 Gene3D - 1217 1304 IPR044938 -
Spst6g00015 1305 PANTHER ENHANCER OF MRNA-DECAPPING PROTEIN 4 1 1303 IPR045152 GO:0031087
Spst6g00015 1305 MobiDBLite consensus disorder prediction 838 875 - -
Spst6g00015 1305 ProSiteProfiles Trp-Asp (WD) repeats profile. 308 350 IPR001680 GO:0005515
Spst6g00015 1305 MobiDBLite consensus disorder prediction 783 875 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Spst6g00015 Spst-Chr6 448796 456689 Dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Spst6g00015 K12616 - gmx:100798228 2127.44
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Spst6g00015 6 448796 456689 Spst6g00015 6 448796 456689 ECH