Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Spst5g02082 ATGGCACCAACTCTTACTTCATCAGTGTTTTTGGCTTTGCTCTGTGCTGCTTCAGCTTTTGCTGCCCTTGAGCCTAGAGTACCAGAAGCTTACCTTCAAAATGGCAACTTTGAGGAGCAGCCCAACCCCAAATACCTCAAGAAAACAAAGCTCGTGGGGAAATTTGCTTTGCCCAAATGGGAGATCAATGGTCTGGTTGAGTATGTCTCTGGGGGGCCCCAACCTGGAGGCATGTTCTTCCCAGTTACTCATGGAATCCATGCTGTGAGACTTGGCAATGAGGCCTCAATCTCCCAAACCATTAAGGTCAAACCGGGTCAACTGTATGCTCTAATTCTTGGGGCCTCGAGGACTTGTGCACAAGATGAAGTTTTGAGAATCTCTGTGCCTCCACAGACCGGTGATGTTCCTTTGCAGACCATTTATAACCTCAATGGTGATGTTATTGCTTGGGGGTTTAAGGCCACTACTAACGCCGTCAAAGTGACTTTCCACAACCCTGGAGTTCAAGAAGATCCAGCTTGTGGCCCACTTTTGGATGCCATTGCTATCAGGGAGTTCTACCCTCCAAGGCCTACAAGAGTTAACTTGGTAAAAAATCCTGGTTTTGAGGAGGGTCCATTCCCCATTTTCAACTCTACCAACGGTGTTTTGCTCCCTCCTCAACAACAAGATGGGTTCTCCCCACTCCCTGGTTGGATCATTGAGTCCCTCAAGGCTGTGAAGTTTATTGATTCAAAGCATTTCAATGTCCCATTTGGGCTGGGAGCAGTGGAGCTTGTGGCAGGCAGGGAAAGTGCCATTGCCCAGGTCATCAGAACAGTTACCAACAAAGTCTACAACATCACATTTTCAGTTGGAGATGCCAAAAATGGGTGCCATGGATCCATGATGGTTGAAGCATTTGCTGCTAAAGATACCTTCAAAGTTCCCTTCAAATCTGAAGGGAAGGGAACATTCAGGACTGTGAGTTTCAAGTTCAAAGCTATTGCACTCAGAACCAGACTCACTTTCTACAGCTCCTTCTACCATACCAGAATTGATGACTATGGTTCTCTTTGTGGTCCTGTTATTGATCAAGTCATAGTGTTCCCTGTTGTCTAA 1104 0.4647 MAPTLTSSVFLALLCAASAFAALEPRVPEAYLQNGNFEEQPNPKYLKKTKLVGKFALPKWEINGLVEYVSGGPQPGGMFFPVTHGIHAVRLGNEASISQTIKVKPGQLYALILGASRTCAQDEVLRISVPPQTGDVPLQTIYNLNGDVIAWGFKATTNAVKVTFHNPGVQEDPACGPLLDAIAIREFYPPRPTRVNLVKNPGFEEGPFPIFNSTNGVLLPPQQQDGFSPLPGWIIESLKAVKFIDSKHFNVPFGLGAVELVAGRESAIAQVIRTVTNKVYNITFSVGDAKNGCHGSMMVEAFAAKDTFKVPFKSEGKGTFRTVSFKFKAIALRTRLTFYSSFYHTRIDDYGSLCGPVIDQVIVFPVV 367
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Spst5g02082 367 PANTHER OS02G0527500 PROTEIN-RELATED 11 365 - -
Spst5g02082 367 Gene3D - 192 350 - -
Spst5g02082 367 Pfam Protein of unknown function (DUF642) 31 185 IPR006946 -
Spst5g02082 367 Pfam Protein of unknown function (DUF642) 196 363 IPR006946 -
Spst5g02082 367 FunFam DUF642 family protein 192 363 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Spst5g02082 Spst-Chr5 56284708 56286859 Dispersed/Transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Spst5g02082 - - gmx:100804119 701.819
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Spst5g02082 5 56284708 56286859 Spst2g02910 2 28874556 28874909 ECH
Spst5g02082 5 56284708 56286859 Spst5g02082 5 56284708 56286859 ECH