Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Spst5g01461 ATGCAGGCCTTCTCACCCAATGGAGGGGTTGTAAGAGTGCAATCACACTCTAACATTGTTCCAATAACCGTTCCCCTCAAACCTAACAACTTCGCATGGACCCAATACAAATCAACTTCTAGGATCACCCTGAGATGCAATTCTCAAACTCAACCATTTCCATACGTCTGCGCGCCAAAGTCGCCAAGGATCTGCTGTTCCAATGTTGTCCCAGTTCGGTGCAGCATTTCGTCGAGCGGGTACGGTGCAAATGATGGTAGGAGTGTTGGGGAGTGGCTTGTGGTGGCCGGAGAGGTCCTTTCAACGGGATTCCCGTTGTGGGTTTCGATTGCGTCTGTTTTGGGGTTGATGAAACCCGATTGCTTCAACTGGGTCACTCCCAAATTAAGCATCGCGGGGCTCAACATCATCATGTTGGGGATGGGTATGACTCTCACTCTTGATGATCTTCGTGGGGTTCTTGCCATGCGTAAGCAAGTACTCTCAGGTTTTTTCATTCAGTATTCGGTTAGTGATGCCACTGTCTGCATTTCTTATAAGCAAACTCTTAAATCTTCCATCACATTCCGCAGCAGGTTTGATATTACTTGGATCATGACACCTTTTCTGACAACCAAACTCGCTGGCAAATATGTAGCAGTGGATGCACCTGCCTTATTGATTTCAACATTGCAAGTTGTGTTTGTTCCTGTGTTGGCTGGTGCATTTCTGAACCAGTTTTTCCAACCTATTGTTAAATCTGTGTCTCCATTGATGCCACCCATTGCTGTAACGACTGTAGCAATTTTATGTGGAAATGCTATTGCCCAGAGTTCTTCTGCAATGCTTGTGTCTGGTGGACAAGTTATGTTAGCCACCTTCCTTCTTCAAGCTTCCGGCTTTTTCTTTGGCTACGTATTCGCAAGATTGCTTGGGATAGATCTGTCATCATCACGAGCCATATCTGCTCAGGTTGGCACCAAGAACGGTGTTCTGGCTATTGTTCTTGCTACAAAGCACTTTGGAGATCTCCTAACTGCAGTACCCGGTGCTGTTTCCATCGCAAACCAGGCAATTGTTGGTAGTATTCTTGCAGGAATTTGGAGACGCTCTGTGCGATGA 1101 0.4641 MQAFSPNGGVVRVQSHSNIVPITVPLKPNNFAWTQYKSTSRITLRCNSQTQPFPYVCAPKSPRICCSNVVPVRCSISSSGYGANDGRSVGEWLVVAGEVLSTGFPLWVSIASVLGLMKPDCFNWVTPKLSIAGLNIIMLGMGMTLTLDDLRGVLAMRKQVLSGFFIQYSVSDATVCISYKQTLKSSITFRSRFDITWIMTPFLTTKLAGKYVAVDAPALLISTLQVVFVPVLAGAFLNQFFQPIVKSVSPLMPPIAVTTVAILCGNAIAQSSSAMLVSGGQVMLATFLLQASGFFFGYVFARLLGIDLSSSRAISAQVGTKNGVLAIVLATKHFGDLLTAVPGAVSIANQAIVGSILAGIWRRSVR 366
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Spst5g01461 366 Gene3D - 195 364 IPR038770 -
Spst5g01461 366 Gene3D - 91 180 IPR038770 -
Spst5g01461 366 PANTHER SODIUM-BILE ACID COTRANSPORTER 91 170 IPR004710 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Spst5g01461 Spst-Chr5 43070828 43074967 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Spst5g01461 59 364 Organic Solute Cotransporters AT1G78560 52.507 5.12e-110 325
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Spst5g01461 K03453 - gmx:100788854 498.434
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Spst5g01461 5 43070828 43074967 Spst5g01461 5 43070828 43074967 ECH