Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Spst5g01405 ATGGGTTGTGCTGGATCTTCACAATCCAAGCCTGATGGTGCAGTAAAAAAGATCCGGAAGCCTAAGCCATGGAAGCATCCTCAGCCTATAACAAAGACTCAGCTAACACAATTACGTGATGAGTTTTGGGACACAGCTCCTCACTATGGTGGCCGGAAAGAGATTTGGGATGCTCTTCGAGCTGCTGCCGAGGCTGAACTAACTTTAGCACAAGCAATTGTGGATAGTGCTGGGGTAATTGTCCAAAGTTCTGATTTGACAGTATGCTATGATGAAAGAGGAGCAAAGTATGAGCTACCCAAGTACGTTTTGAGCGAGCCAACTAACCTGATTCGGGACAGTTAA 345 0.4609 MGCAGSSQSKPDGAVKKIRKPKPWKHPQPITKTQLTQLRDEFWDTAPHYGGRKEIWDALRAAAEAELTLAQAIVDSAGVIVQSSDLTVCYDERGAKYELPKYVLSEPTNLIRDS 114
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Spst5g01405 114 Gene3D - 31 104 IPR038169 -
Spst5g01405 114 MobiDBLite consensus disorder prediction 1 31 - -
Spst5g01405 114 PANTHER UBIQUITIN DOMAIN CONTAINING 1 PROTEIN-RELATED 1 113 IPR039869 -
Spst5g01405 114 Pfam Ubiquitin-binding domain 16 113 IPR032752 -
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Spst5g01405 - - gmx:100306399 225.328
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Spst5g01405 5 38653563 38657921 Spst5g01405 5 38653563 38657921 ECH