Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Spst5g01404 ATGAAAGGTGTGAGGTGGGCAAGAGCATTTCACTTTCGTCACCACACCTTCCACGCTTTCCTCGAAAACCTCACTTTCCGCATCATTCTCAAAATAGCTATGAAAAATCACATTCTCTTCCTATTCCTTCTCATTGCACTTGCCCCCACTTTCTCTCTCCGCTTTCAACCTCATGCAGCTCCGGCAGGGCCCTTGATTAAGCATCTGTCTTCAATCATCAAATGGACAAGGTCTACCTCCAAGACGCCACACTCAGATGGGAATGTTCTTCAATTTGAAAATGGTTACGTCGTTGAGACTGTTGTGGAAGGGAACGAGATTGGGGTCATCCCTCACAGGATCCGTGTCTCTGAGGAAGATGGTGAACTCTTTGCTGTTGATGCAATTAATAGCAACATTGTTAGGATAACTCCGCCGTTGTCCCAATATAGTAGAGGAAGACTGGTGGCAGGGTCATTTCAGGGATACACTGGTCATGTGGATGGAAAACCAAGTGATGCTCGTTTCAATCATCCCAAAGGCATAACCGTGGATGATAAAGGGAATGTTTATGTTGCTGATACTCAGAATCTTGCCATCAGAAAGATTGGAGATTCTGGTGTGACGACCATTGCTGGAGGAAAATCAAATGTCGCAGGCTACAGAGATGGGCCTAGTGAGGATGCTAAGTTCTCTAATGATTTTGATGTGGTTTATGTGCGACCCACCTGTTCCTTGCTGGTCATTGATAGAGGAAATGCTGCCCTTCGGCAAATCTCCCTTGACCAGGAGGATTGTGATTATCAGTCTAATTCAATTTCGAGTACAGATATCCTTACAGTTGTCGGTGCTGTTATAGTAGGATATGCTACATGTATGCTTCAGCAGGGATTTGGATCCTCTTTCTTCTCAAAAGCACGACCATCAGAAAGAGAGTTTAAAGGGCCAGCAGGCAATGAGAAACACATGTCAATCTTGGAGAGCAGTAAAGAGGAGCCGGGATGGCCGTCTTTTGGACAGCTCATTGTTGATCTTTCTAAGCTTTCCCTTGAAGCATTAGCTGGTGCATTCATTCAATTCATACCTTCACATTTCAGACCTGGCAAGTCCAAGAAAGGCTTAACACCACTGAAAGATCGTCTTGTGATGCCTGAAGATGAAGTGCAGCCTCCATTGATCAACAGGCAAAATGCTCAAGGGCATACTCCTCTTACTGAAACTCGGCTGCCAGCGCATGTCCATGCTCCTCTTGCCGATAGTCGAATGGCGTCACATGGCCATGCTCCTCTTATGGATAATCGGCCGGCGCCACAGGTCCACACTCCAACCACAGCTGAGAAATATTCAGAGATGAAGCCCCCCAAGATAAAATCAAGCAGTTTCAAGGACCCGTCTTTGTCAAACAAGCACAGATCGTCAAAACGACCTGATTATGCGGAATTCTATGGATCAACTGAGATTCCTCCATACACCAAATCTAAGAGTCAGAAAGAAAGGCCAAGACATAGACAACGAGAAAAGAGTGGAGAATTTATTATGGGGGCGGTTGGAACTGAGGCTAAACCTGTTGAAACAAGGGCTGTTGATCATAGTAGTCCAAAGTTTGATCATTACAGCATGAGGACTAAGTATGCATCTGAGGAGACCTTCCGGTTCAACTCTCAGTAA 1647 0.4548 MKGVRWARAFHFRHHTFHAFLENLTFRIILKIAMKNHILFLFLLIALAPTFSLRFQPHAAPAGPLIKHLSSIIKWTRSTSKTPHSDGNVLQFENGYVVETVVEGNEIGVIPHRIRVSEEDGELFAVDAINSNIVRITPPLSQYSRGRLVAGSFQGYTGHVDGKPSDARFNHPKGITVDDKGNVYVADTQNLAIRKIGDSGVTTIAGGKSNVAGYRDGPSEDAKFSNDFDVVYVRPTCSLLVIDRGNAALRQISLDQEDCDYQSNSISSTDILTVVGAVIVGYATCMLQQGFGSSFFSKARPSEREFKGPAGNEKHMSILESSKEEPGWPSFGQLIVDLSKLSLEALAGAFIQFIPSHFRPGKSKKGLTPLKDRLVMPEDEVQPPLINRQNAQGHTPLTETRLPAHVHAPLADSRMASHGHAPLMDNRPAPQVHTPTTAEKYSEMKPPKIKSSSFKDPSLSNKHRSSKRPDYAEFYGSTEIPPYTKSKSQKERPRHRQREKSGEFIMGAVGTEAKPVETRAVDHSSPKFDHYSMRTKYASEETFRFNSQ 548
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Spst5g01404 548 Pfam NHL repeat 169 195 IPR001258 GO:0005515
Spst5g01404 548 PANTHER - 62 537 - -
Spst5g01404 548 Gene3D - 69 254 IPR011042 -
Spst5g01404 548 MobiDBLite consensus disorder prediction 417 527 - -
Spst5g01404 548 SUPERFAMILY NHL repeat 90 254 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Spst5g01404 Spst-Chr5 38556732 38561631 Transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Spst5g01404 - - vra:106778116 963.37
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Spst5g01404 5 38556732 38561631 Spst5g01404 5 38556732 38561631 ECH