Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Spst5g01390 ATGCAATTCCTAGTTGACCTGTTTTTATTAAACAGACCTAAACGACGACGTCTACTTCCCAGTTCGAAGCAAGGGTTAGAAGTCCTGCACCGCTCGGATTACACCGCCACAGTCGTCGGCGAACAATTCCTGAGTTTGTTATCTACAAAGTTCCAATTTTTACTTTCAACCATGGCAAAGGGAGCAAGCACAAAACTGAGTATCGCAATAATTCACCCGGATCTTGGCATAGGTGAATATTCACTGTTCCCCATTGCTTTCCAGTCCAGTGGAGCTGAGAGATTGATTGTGGATGCCGCTGTTGAACTTGCATCCCAGGGCCATGAAGTTCATGTTTTTACTGCACATCATGACAGAAATAGATGCTTTGAAGAAACTGTTACTGGGACCTTTCCAGTTACTGTGTATGGTTCCTTTCTTCCTCGTCATGTGTTCTACCGTCTTCATGCATTGTGTGCATACCTTCGGTGCCTATTTGTCGCTTTCTGTGTACTTTTCATGTGGCATTCATTTGATGTTATACTGGCAGATCAAGTCTCTGTAGTTATTCCTATCTTGAAACTTAAAAGGTCAATAAAGGTTGTATTCTACTGTCATTTTCCGGACTTGTTACTGGCTCAACGTTCAACTTTCATTAGGAGGATGTATAGAAAACCAATAGACTATGTAGAAGAAATAACAACTGGAATGGCTGATTTGATACTTGTTAACAGCAACTTCACGGCCTCTACTTTTGCAAATACTTTTAAGTCTCTACATGCTAACGGAATTCGACCAGCTGTTCTATATCCAGCTGTCAATGTAGCTCAGTTCAATGAACCCAGTACCTTTAAGCTGAATTTCCTTTCCATCAATCGCTTTGAAAGGAAGAAGAACATACAATTAGCTATTTCAGCTTTTGCTATGCTTCACTCGCTGGAAGGAATATCTAAGCATAAAGATATTACTAATGCTTCTTTGACTATTGCAGGTGGCTTTGACAAACGGTTGAAGGAGAATGTGGAGTACTTAGAAGAGCTTAAAGATTTAGCAGAAAAGGAAGGAGTCTCTAGTAAAATAAGATTCATCACCTCTTGCCCTACAGATGAAAGAAATGCACTTCTTTCAGAATGCTTGTGTGTTCTTTACACACCAAAGGATGAGCACTTTGGCATAGTTCCTCTGGAGGCAATGGCAGCATATAAACCTGTTATCGCTTGCAATAGTGGTGGCCCTGTGGAGTCAATTAAGAATGGTGTAACAGGATTCCTTTGTGATCCTACACCACAAGATTTTTCTTCAGCAATGGCTAAGATTATAAGTTATCCTCAGGTGGCAGAGAAAATGGGCAGAGAAGCTAGGAAGCATGTTGTTGAGTCATTCTCTACGAAGTCATTTGGCCAGCATCTAAATAGATACCTAGTTGACATTCACCGGGGAAAGGAGGACTGA 1431 0.4109 MQFLVDLFLLNRPKRRRLLPSSKQGLEVLHRSDYTATVVGEQFLSLLSTKFQFLLSTMAKGASTKLSIAIIHPDLGIGEYSLFPIAFQSSGAERLIVDAAVELASQGHEVHVFTAHHDRNRCFEETVTGTFPVTVYGSFLPRHVFYRLHALCAYLRCLFVAFCVLFMWHSFDVILADQVSVVIPILKLKRSIKVVFYCHFPDLLLAQRSTFIRRMYRKPIDYVEEITTGMADLILVNSNFTASTFANTFKSLHANGIRPAVLYPAVNVAQFNEPSTFKLNFLSINRFERKKNIQLAISAFAMLHSLEGISKHKDITNASLTIAGGFDKRLKENVEYLEELKDLAEKEGVSSKIRFITSCPTDERNALLSECLCVLYTPKDEHFGIVPLEAMAAYKPVIACNSGGPVESIKNGVTGFLCDPTPQDFSSAMAKIISYPQVAEKMGREARKHVVESFSTKSFGQHLNRYLVDIHRGKED 476
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Spst5g01390 476 FunFam alpha-1,3/1,6-mannosyltransferase ALG2 274 455 - -
Spst5g01390 476 Pfam Glycosyl transferases group 1 280 448 IPR001296 GO:0016757
Spst5g01390 476 Gene3D Glycogen Phosphorylase B; 272 455 - -
Spst5g01390 476 FunFam alpha-1,3/1,6-mannosyltransferase ALG2 63 273 - -
Spst5g01390 476 Pfam Glycosyltransferase Family 4 90 268 IPR028098 -
Spst5g01390 476 SUPERFAMILY UDP-Glycosyltransferase/glycogen phosphorylase 88 465 - -
Spst5g01390 476 Coils Coil 327 347 - -
Spst5g01390 476 Gene3D Glycogen Phosphorylase B; 76 271 - -
Spst5g01390 476 CDD GT4_ALG2-like 66 463 - -
Spst5g01390 476 PANTHER ALPHA-1,3/1,6-MANNOSYLTRANSFERASE ALG2 62 471 IPR027054 GO:0004378|GO:0006486
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Spst5g01390 58 476 Glycosyltransferase AT1G78800 73.634 0.0 649
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Spst5g01390 K03843 - gmx:100809168 740.339
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Spst5g01390 5 37904533 37908095 Spst5g01390 5 37904533 37908095 ECH