Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Spst5g01316 ATGTTGTCATTGACTTCATTGGCTAGTATTGTACCACAGGTATATCGAGGGCTTGATGTTGAATCTGCAAAGCCTTCCCCAAATGAAAAAAAAGGAGGTACTGCATCATCTCATCTGGTTGACATACTGCACCCATCTGAAGACTATTCTGTTGGGCAGTTTTTTGAGGAGGCAAGGCAAGCTACTAGATGTATTCTTGACAATGGCCGTGTTCCCGTAGTTTTTGGAGGCAATGGATTGTATTTAAGATGGAATGAAGACTGGGATGCAACTGTGCAGTTGGTGGTAAAAGTAGGTGATCCAAAGGCTCAATTTCTAGCAGTGAATGATTGGTACCAATTACGGTGTAGCCTAGAGATTATTAAGTCTAGTGGACCACCTCCTTCTGCATTTCGGGTGCCATATGATTCTTTCAGGGAACAGGGTGAATATGGTGTTGCTGAGGGTTCTGAGTCGTCTGATATGAACACTTACGGTGATGCAATGGAAGAAACCATCTTGTCAGAGTTAGACTATGAGTTTATATGCTTTTTCCTTTCTAGTCATGGACTTGACCTCTATAAATCAATTGATTATCAGTGTGAAGATATGCTTTTAGGTACATCCTGA 609 0.4154 MLSLTSLASIVPQVYRGLDVESAKPSPNEKKGGTASSHLVDILHPSEDYSVGQFFEEARQATRCILDNGRVPVVFGGNGLYLRWNEDWDATVQLVVKVGDPKAQFLAVNDWYQLRCSLEIIKSSGPPPSAFRVPYDSFREQGEYGVAEGSESSDMNTYGDAMEETILSELDYEFICFFLSSHGLDLYKSIDYQCEDMLLGTS 202
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Spst5g01316 202 Gene3D - 11 200 IPR027417 -
Spst5g01316 202 PANTHER TRNA DIMETHYLALLYLTRANSFERASE 13 198 IPR039657 -
Spst5g01316 202 Pfam IPP transferase 13 198 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Spst5g01316 Spst-Chr5 27006780 27009352 Dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Spst5g01316 K00791 - gmx:100808814 313.538
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Spst5g01316 5 27006780 27009352 Spst5g01316 5 27006780 27009352 ECH