Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Spst5g01315 ATGATTTTATATGCAGAGATAAGGTATTCTATTGAAGTAGATATTTTACACCATTTAGTTGTGCAACACATTCTAGAACCATCCCTCTATAAAACTGAAACGAAGAAAACCCTAAACCCTCTTCATTTCACTCTCATTTCCTTCTTCTCCCAGAACCCATCTCTCTCTTTGTTTCCAGCCATGGCCACTCAGATCTTCTCTCGTGTCTTCCCCAAAACCCTAACCCTAGTCCCCTTCCTCTCCCGCTCCCTCACCTCCAATCCTTCTTCTCTCTCCGCCCTCTCCTTCCTCCGTCGCATCTCTGTCGCCTCCAACCCCTCCCTCCGCCGTCTTCTCCTCCCCGCCACCCCTTCCCTCCGTGCTCTCTCCACTCGCGCCACCACCTCCTCCCTCAACGACCCCAACCCCAACTGGTCCAACCGGCCCCCCAAAGAAACCATCTTGCTCGATGGCTGCGACTTCGAACACTGGCTCGTCGTCATGGAGAAGCCCGAAGGTGACCCCACTCGCGACGAAATCATCGATAGCTACATCAAAACCTTGGCCAAGGTTATCGGAAGTGAAGAGGAAGCTAGGATGAAGATATATTCGGTTTCCACTAGGCATTACTTTGCGTTTGGGGCGCTTGTGTCTGAAGAGCTTTCTTACAAGATTAAAGAATTACCTGGAGTTCGGTGGGTGCTTCCTGATTCGTATTTGAATGTTAAGGAAAAGGATTATGGAGGTGAGCCCTTTATTAACGGGCAAGCGGTTCCTTATGATCCCAAGTATCATGAAGAGTGGGTTAGAAATAATGCCAGGGCAAATGAGAGAAATAGGCGCAATGACCGGCCTCGCAATGCTGACAGGTCAAGGAACTTTGAGAGGAGGAGGGAAAATGTTGTCAACAGAGACATGCAGGGTAGGCCCCCTATGCCAAATCCTGGTCCTAATATGAGTGGTGCTCCTCCAAGCAATGCAGGAGGGTTCCCTCCACACAATGCAGGTGGATATGCACCTCCAGGCAATCAGGGTGGATATGCACCTCCTAACAACCAGGGTGGATATGCGCCTCCAAACAATCAGGGTGGATATGCACCTCCAAACACTCAGGGTGGATATGCACCTCCAAACACTCAGGGTGGATATGCACCTCCTAACAATCAGGGTGGGTATGCTGCTCCTAACAACCCAGGTGGATATGCTGCTCCTAACCACCCAGGTCCCTCTAACAATGCGGGCGGTGGTTACCCTCCTCCTCCTAACATGGGTGGTGGCTATGGTCCAGGAGGTGGAGCATTTCAACCAAATGCAGGAGGATGGTCAAACAATGCTCCCAATAGAGACACGCCAAGTAGGGATATGGGAGGAGCACCTGGTGGGAACCCATACTCTGGGTGA 1380 0.5101 MILYAEIRYSIEVDILHHLVVQHILEPSLYKTETKKTLNPLHFTLISFFSQNPSLSLFPAMATQIFSRVFPKTLTLVPFLSRSLTSNPSSLSALSFLRRISVASNPSLRRLLLPATPSLRALSTRATTSSLNDPNPNWSNRPPKETILLDGCDFEHWLVVMEKPEGDPTRDEIIDSYIKTLAKVIGSEEEARMKIYSVSTRHYFAFGALVSEELSYKIKELPGVRWVLPDSYLNVKEKDYGGEPFINGQAVPYDPKYHEEWVRNNARANERNRRNDRPRNADRSRNFERRRENVVNRDMQGRPPMPNPGPNMSGAPPSNAGGFPPHNAGGYAPPGNQGGYAPPNNQGGYAPPNNQGGYAPPNTQGGYAPPNTQGGYAPPNNQGGYAAPNNPGGYAAPNHPGPSNNAGGGYPPPPNMGGGYGPGGGAFQPNAGGWSNNAPNRDTPSRDMGGAPGGNPYSG 459
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Spst5g01315 459 PANTHER MULTIPLE ORGANELLAR RNA EDITING FACTOR 2, CHLOROPLASTIC-RELATED-RELATED 77 358 IPR039206 GO:0016554
Spst5g01315 459 MobiDBLite consensus disorder prediction 268 297 - -
Spst5g01315 459 MobiDBLite consensus disorder prediction 268 459 - -
Spst5g01315 459 MobiDBLite consensus disorder prediction 339 387 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Spst5g01315 Spst-Chr5 27003561 27005560 Dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Spst5g01315 - - aprc:113854647 533.872
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Spst5g01315 5 27003561 27005560 Spst5g01315 5 27003561 27005560 ECH