Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Spst5g01016 ATGCCTGAGGCTCCCAGAGACTCCACGGTAGAGCATGACCTGGACCTTGCAGAGAAGAACAGGGAGATTCTGAACTTCATTGAGGATGTCACTACGAACGCAGATGACGTTCAGAAGAAGGTTCTGTGTGAAATTCTGTCTCTCAATGCAAACGTTGAGTACCTGCGACGACATGGTTTGAATGGCCAAACGGAGTGTGACACCTTCAAGAAACTTCTCCCTGTCATTACCTACGAGGATGTCCAACCTGACATTAACCGCATCGCCAATGGTGACACCTCTCCAATCCTCACCTCCAAACCCGTCACAGAGTTTCTCACCAGCTCTGGGACATCGGGGGGTGAGAGAAAGTTGATGCCAACAATTGAGGAGGAGCTAGGGAGGAGGTGTATGTTGTATAGTCTGTTGATGCCAATAATGAGCCAGTTTGTTCCAGACTTAGAAAAAGGTAAAGGAATGTACCTAATGTTCATAAAATGTGAGTCCAAAACACCTGGAGGAATTGTAGCTCGTCCAGTTCTCACAAGCTATTACAAGAGCCCCTACTTTAGGGACAGACCGTACGACCCTTACACAAATTACACAAGCCCAAATGAGACAGTCCTTTGTCCTGATTCCTACCAAAGCATGTACTCCCAACTCCTCTGTGGCCTTTGCCAAAACAAAGAGGTTCTCAGAGTAGGGGCCATCTTTGCCTCTGGCTTCATTCGTGCCATTCGGTTCCTCGAGAAACATTGGACCCTCCTTTGCAACGATATCAGAACAGGAACCGTGAACCCTTTGATCAGTGACACGTCAGTGAGAGAGGCTGTGATGAGGATCCTGAAGGCTGATCCCAAGCTTGCGGATTTGATTCACAAGGAGTGTAGCAAGGGGTCTTGGCAGGGGATTATTACCAGGCTTTGGCCCAATACAAAGTATGTGGATGTTATTGTGACGGGGACTATGGCACAATACATTCCCACTTTGGATTACTATAGCAATGGCCTCCCACTTGTGTGCACCATGTACGCTTCTAGTGAGTGTTACTTTGGGGTCAACCTCAATCCTCTTTGCAAACCTAGCCAAGTGTCTTACACCCTCATCCCCACCATGTGTTACTATGAATTCCTACCCGTCAACCGAACCAATGACCTCGCTGTACCTTCTAGACCTTCACCAACATCTCTCAGTCAGACACAACACCAAGAATTGGTGGAGCTTGTTGATGTCAAGCTTGGTCAAGAATATGAGCTCGTTGTTACAACTCATGCTGGACTTTATAGGTATAGAGTGGGAGATATACTAAGGGTGACAGGATTCAAGAACAAGGCCCCACAATTTAGCTTTGTATGCAGAAAGAACGTTGTCCTGAGCATAGATTCTGACAAGACTGATGAGGTTGAGCTACAAAACGCAATGAAGAATGCAGTTACACACTTGGTGCCATTTGATGCACACGTGAGTGAGTACACTAGCTGCGCAGACACCACCACAATCCCGGGACACTATGTGCTGTATTGGGAGCTAAGCCTCAAAGGGTCAACCCCTATTCCACCCTGTGTGTATGAAGATTGTTGTCTAACAATTGAGGAGTCACTCAACAGTGTGTATCGCCAGGGTCGTGTCTCAGACAAATCAATAGGACCACTTGAGATCAAGATTGTGGAACAGGGTACCTTTGACAAGCTCATGGACTATGCCATCAACTTAGGGGCATCAATTAACCAGTACAAGGCACCAAGGTGTGTCAAGTTTGCTCCTATAGTGGAGTTGTTGAACTCAAGGGTAACATCCAACTATTTTAGTCCCAAGTGTCCTAAGTGGGTTCCAGGACACAAACAGTGGATTCATTGTAATTGA 1842 0.4669 MPEAPRDSTVEHDLDLAEKNREILNFIEDVTTNADDVQKKVLCEILSLNANVEYLRRHGLNGQTECDTFKKLLPVITYEDVQPDINRIANGDTSPILTSKPVTEFLTSSGTSGGERKLMPTIEEELGRRCMLYSLLMPIMSQFVPDLEKGKGMYLMFIKCESKTPGGIVARPVLTSYYKSPYFRDRPYDPYTNYTSPNETVLCPDSYQSMYSQLLCGLCQNKEVLRVGAIFASGFIRAIRFLEKHWTLLCNDIRTGTVNPLISDTSVREAVMRILKADPKLADLIHKECSKGSWQGIITRLWPNTKYVDVIVTGTMAQYIPTLDYYSNGLPLVCTMYASSECYFGVNLNPLCKPSQVSYTLIPTMCYYEFLPVNRTNDLAVPSRPSPTSLSQTQHQELVELVDVKLGQEYELVVTTHAGLYRYRVGDILRVTGFKNKAPQFSFVCRKNVVLSIDSDKTDEVELQNAMKNAVTHLVPFDAHVSEYTSCADTTTIPGHYVLYWELSLKGSTPIPPCVYEDCCLTIEESLNSVYRQGRVSDKSIGPLEIKIVEQGTFDKLMDYAINLGASINQYKAPRCVKFAPIVELLNSRVTSNYFSPKCPKWVPGHKQWIHCN 613
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Spst5g01016 613 PANTHER GH3 DOMAIN-CONTAINING PROTEIN 20 599 IPR004993 -
Spst5g01016 613 Pfam GH3 auxin-responsive promoter 27 578 IPR004993 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Spst5g01016 Spst-Chr5 10058648 10061130 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Spst5g01016 15 596 EF-hand Containing Proteins AT1G23160 49.239 0.0 574
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Spst5g01016 K14487 - gmx:100797120 1144.41
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Spst5g01016 5 10058648 10061130 Spst5g01016 5 10058648 10061130 ECH