Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Spst5g01002 ATGGTACGTGTTGGATGCGAAGTACTGCGTGATACACCGAATATTAGTTTAAAAGGTCATGGACTCATCAAATTGGGAACTGATAAAGAAAAGGAGGAAATGGAGGAAGCACTTATGAGGGTGAAGAAGAGGAAAGATGAAGGTGCTTCTTCTCCTTCAACGACATACTGTGTCACTGGAGCAACAGGGTATATTGGTTCATGGCTTGTGAAGACTCTTCTTGAAAGAGGCTACACTGTTCATGCCACTGTTAGAGATCCTGAAAAATCATTACACCTGCTGTCATTATGGACAAGAGGCGACCGATTGAGAGTTTTCAAAGCGGATTTGAATGAAGAAGGGAGTTTTGATGAGGCTGTAAGAGACTGTGATGGCGTTTTTCATGTTGCAGCTTCAATGGAATTCAATGTGGGTCAGAAAGAAAACATTGAGGCCTATGTTCAAACAAATATAATTGATCCTTCAATCAAAGGGACCTTAAACCTTCTAAAGTCCTGCATGAATTCCAATTCTGTGAAAAGGGTTGTTTTCACATCCTCAATCAGTACCATCACTGCCAAAGACAACAATGGGAAGTGGAAACCTGTTGTTGATGAATCTTGCCAGATCCAAAGTGAACATGTGTTGAAAACAAAAGCAAGTGGATGGGTTTATGCCCTTTCAAAGCTTCTAACAGAAGAGGCAGCATTTAAGTTTGCAAAAGAGAATGACATTGATCTTGTGTCAGTCATAGCAACCACTGTTGCAGGCCCATTCTTCACTGCTTGTGTACCATCAAGTGTTAAAGTGCTACTGTCACCATTAACAGGTGAACCTGAATTCTTCAAGATATTATCTGCTGTAAATGCAAGAATGGGGTCAATTGCTTTAGTTCATATTGAAGATATATGCAGTGCACATATTTTTCTAATGGAGCATTCTAAAGCAGAAGGTCAATACATATGCAGCAACCAAAGTTATCCGTTGTCTATGTTGGCTAATCTTCTTACCAAAGAGTATTCTTACTCAAATAAGAAAAGGATAGATGAGAAAAATTATGATAAAGTTCCTTCTGATATTTGCTCAAAGAAATTACAAGATCTGGGTTTTAGTTACAAGCATGGACTTGAAGACATAATTCATCAGACAATTATTTGTTGCTTAGACTATGGTTATTTACCTCCCATTAGAAAATAG 1176 0.3844 MVRVGCEVLRDTPNISLKGHGLIKLGTDKEKEEMEEALMRVKKRKDEGASSPSTTYCVTGATGYIGSWLVKTLLERGYTVHATVRDPEKSLHLLSLWTRGDRLRVFKADLNEEGSFDEAVRDCDGVFHVAASMEFNVGQKENIEAYVQTNIIDPSIKGTLNLLKSCMNSNSVKRVVFTSSISTITAKDNNGKWKPVVDESCQIQSEHVLKTKASGWVYALSKLLTEEAAFKFAKENDIDLVSVIATTVAGPFFTACVPSSVKVLLSPLTGEPEFFKILSAVNARMGSIALVHIEDICSAHIFLMEHSKAEGQYICSNQSYPLSMLANLLTKEYSYSNKKRIDEKNYDKVPSDICSKKLQDLGFSYKHGLEDIIHQTIICCLDYGYLPPIRK 391
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Spst5g01002 391 PANTHER NAD DEPENDENT EPIMERASE/DEHYDRATASE 55 376 - -
Spst5g01002 391 FunFam Dihydroflavonol 4-reductase 47 388 - -
Spst5g01002 391 SUPERFAMILY NAD(P)-binding Rossmann-fold domains 53 385 IPR036291 -
Spst5g01002 391 CDD FR_SDR_e 56 363 - -
Spst5g01002 391 Pfam NAD dependent epimerase/dehydratase family 57 309 IPR001509 -
Spst5g01002 391 Gene3D - 50 391 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Spst5g01002 Spst-Chr5 9728664 9731205 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Spst5g01002 47 377 Miscellaneous Gene Families AT4G27250 57.485 3.09e-135 389
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Spst5g01002 - - gmx:100793923 619.387
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Spst5g01002 5 9728664 9731205 Spst5g01002 5 9728664 9731205 ECH