Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Spst5g00996 ATGCATAAGGATACCACATATCCTTTAGCCATACGCAATATGCCTGAGATGGTTTCTAAGAAAGGCAACAAAACTCTCTCTTCACCAAAGCCTCACAATTGTTCATTTTTCCTAGCATACATGACTAGTTCTAACAAGAGGCTTGAGGTTCAAACAGAAGATCAAACTCCACATAAATGGTGTGTTTCACTGGGAGAAGAGCCTTTCAAAAGATTCTTCAGCCAGACTAATCCAGCAGTGCATAAGGTTTTTGGTGATGGATCACTTTTCAGTCCACTGTTATTTGGGAAGTTCTTTGATCCTTCTGATGCCTTCCCTCTATGGGAGTTTGAGTCAGATGTATTGTTATCTCATTTAAGGAGCTCCACCCAAAGCACTGTGCATTGGTGTCAGACAGGTGAAGGCTATATATTAAAAGCAGAAATTCCAGGAACTGGGAAAAATAACATTCAAGTCCTTGTTGATAAAGGGAAGGTTGTGGAAATTAGTGGACCGTGGAAGCAGCAAAGAGACTCAAAGGCACATGACTGGAGGTGTGGCCCTTGGTGGGAACATGGATATGTGCGCAGGCTTGAGATGCCAGAGGATGCAGATTGGAAGAATATAGAAGCATACATACATAATGACATATACTTAGAAATACGAATTCCAAAGAGCCAACAGGGTCGTGATCTTCCTCAGGGAAAGGATGTGGCTTAA 699 0.4206 MHKDTTYPLAIRNMPEMVSKKGNKTLSSPKPHNCSFFLAYMTSSNKRLEVQTEDQTPHKWCVSLGEEPFKRFFSQTNPAVHKVFGDGSLFSPLLFGKFFDPSDAFPLWEFESDVLLSHLRSSTQSTVHWCQTGEGYILKAEIPGTGKNNIQVLVDKGKVVEISGPWKQQRDSKAHDWRCGPWWEHGYVRRLEMPEDADWKNIEAYIHNDIYLEIRIPKSQQGRDLPQGKDVA 232
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Spst5g00996 232 ProSiteProfiles Small heat shock protein (sHSP) domain profile. 118 232 IPR002068 -
Spst5g00996 232 Gene3D - 66 227 IPR008978 -
Spst5g00996 232 Pfam Hsp20/alpha crystallin family 130 231 IPR002068 -
Spst5g00996 232 PANTHER 21.7 KDA CLASS VI HEAT SHOCK PROTEIN 43 225 - -
Spst5g00996 232 SUPERFAMILY HSP20-like chaperones 92 221 IPR008978 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Spst5g00996 Spst-Chr5 9634444 9635788 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Spst5g00996 - - gmx:100306244 384.8
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Spst5g00996 5 9634444 9635788 Spst5g00996 5 9634444 9635788 ECH