Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Spst5g00991 ATGCTAAGCAAGTTCTCCTCTGCTGTTGAATTGTCAAGTGAAATAAGGACTATAGCAGTTGAAGAGGAGGAACTCAAGGCCCTCTTTGGTGTTGCCTTGCCTCATTGTGGTGTCATTGGTTTCAAGGAGTTTATCAAAGTGAAGGTTGCATCAAGGCGTGTCTCTTATCGGATGCTCTTCTATTCACTCTTGTTCTTCACTTTTCTTCTTCGGTTTGTGTTTGTCTTAACACAAGTGGATGGCATTGATGGAGAAAACAAATGCTCTACCATAGGTTGCCTAGGAAAAAAACTAGGACCAAGGATTTTGGGCAGACGGCGTGAATCAACTGTCCCAGAAGTGATATACCAAACATTAGATGAACCTCTTGGCAAACATGAACTTCAGGGTAGGTTTGACATTCCTCAGACCTTAGAAGAGTTCATGACTGAAATGAAGAAAGGTGGATATGATGCCAAGACATTTGCAGTTAAACTTCGAGAAATGGTGACCCTAATGGAAGAAAGAACTAGGTTAGCCAAAATCCAAGAATATCTGTATCGACATGTAGCATCAAGTAGTATACCAAAAGAACTTCACTGCCTTTCCTTGAGTTTGGCCAATGAACACACCAACAATGCTGCAGCACGCCTTCAGCTCCCCGCTGCAGAACTAGTCCCTGCCCTGGTTGACAACTCCTACTTCCATTTTGTTCTTGCCTCAGACAATGTGCTGGCTGCATCCGTTGTTGCAACATCGCTTGTTCGCAACTTTTTGAGACCTCAGAAGGTTGTGTTACACATAATTACAGACAGGAAGACTTATTACCCCATGCAGGCTTGGTTCTCATTGCATTCTTTGTCACCTGCTATAATTGAGGTGAAGGCGTTGCACCATTTTGATTGGTTTACAAAGGGAAAGGTGCCTGTTCTGGAAGCTATGGAGAAGGATCAAAAGGTGAGGTCACAGTTTAGAGGGGGTTCATCAGCTATAGTTGCAAATGCTACTGAGAAGCCAAAAGTTATTGCAGCAAAACTGCAAGCACTTAGTCCCAAGTATAATTCAGTGATGAACCACATCCGGATACATCTCCCAGAGTTATTTCCAAGTCTTAACAAGGTGGTCTTCCTCGATGATGACATTGTGGTACAAACTGATCTTTCACCTCTGTGGGACATCGAAATGAATGGAAAAGTAAATGGAGCTGTAGAAACATGCACAGGAGAAGATAAATTTGTGATGTCAAAGAAGTTGAAAAGCTATTTGAACTTCTCCCACCCTCTAATATCCAAAAACTTTAATCCCAATGAATGTGCCTGGGCCTATGGCATGAACATTTTCGATTTGGAGGCTTGGCGGAAGACTAATATAAGCAACATTTACCATTATTGGGTTGAGCAGAATATCAAATCAGACCTGAGTTTGTGGCAGCTAGGGACATTACCTCCAGGATTGATAGCATTTCATGGTCATGTTCACGTTATTGATCCTTTCTGGCATATGCTGGGATTGGGATATCAGGAAAATACAAGTTTTGCTGATGCTGAGAGTGCTGGTGTTGTCCATTACAATGGCAGGGCAAAGCCATGGCTAGAAATAGCTTTTCCGCAACTAAGGAAATTGTGGACAAAGTATGTTGACTTCTCAGATAAGTTCATCAAGAGTTGTCACATTAGGGCATCATAG 1665 0.4234 MLSKFSSAVELSSEIRTIAVEEEELKALFGVALPHCGVIGFKEFIKVKVASRRVSYRMLFYSLLFFTFLLRFVFVLTQVDGIDGENKCSTIGCLGKKLGPRILGRRRESTVPEVIYQTLDEPLGKHELQGRFDIPQTLEEFMTEMKKGGYDAKTFAVKLREMVTLMEERTRLAKIQEYLYRHVASSSIPKELHCLSLSLANEHTNNAAARLQLPAAELVPALVDNSYFHFVLASDNVLAASVVATSLVRNFLRPQKVVLHIITDRKTYYPMQAWFSLHSLSPAIIEVKALHHFDWFTKGKVPVLEAMEKDQKVRSQFRGGSSAIVANATEKPKVIAAKLQALSPKYNSVMNHIRIHLPELFPSLNKVVFLDDDIVVQTDLSPLWDIEMNGKVNGAVETCTGEDKFVMSKKLKSYLNFSHPLISKNFNPNECAWAYGMNIFDLEAWRKTNISNIYHYWVEQNIKSDLSLWQLGTLPPGLIAFHGHVHVIDPFWHMLGLGYQENTSFADAESAGVVHYNGRAKPWLEIAFPQLRKLWTKYVDFSDKFIKSCHIRAS 554
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Spst5g00991 554 CDD GT8_like_1 228 540 - -
Spst5g00991 554 Pfam Glycosyl transferase family 8 227 527 IPR002495 GO:0016757
Spst5g00991 554 PANTHER GALACTURONOSYLTRANSFERASE 4-RELATED 133 551 IPR029993 GO:0047262
Spst5g00991 554 Gene3D Spore Coat Polysaccharide Biosynthesis Protein SpsA; Chain A 230 548 IPR029044 -
Spst5g00991 554 SUPERFAMILY Nucleotide-diphospho-sugar transferases 229 551 IPR029044 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Spst5g00991 Spst-Chr5 9604641 9607807 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Spst5g00991 32 554 Glycosyltransferase AT5G54690 78.409 0.0 848
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Spst5g00991 K20867 - gmx:100812550 975.696
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Spst5g00991 5 9604641 9607807 Spst5g00991 5 9604641 9607807 ECH