Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Spst5g00983 ATGCAACTGCGTCACTCCTGTGTTCGAAATCTAAGCACTGGATTCCGTTCACGTTCGGCCACCAAACCCGCCACTTCCAACCCTCAACCTTCATCTTCTTCTTCTCCTACTTCTTCAACCTCGTTATTACTTTCGGGACTTGATGAGGATATCACGCTCTCAAGCCTCAAGCTTAAGCGACCCTCTCCTTCAGGTGATTCGGCTAATGGGGTGTTTAAGCATATTTCTTCTATTTTCCATGCGGGTAAGTCAGTGTTGAAACCTGATTATGATGAAATTGATGTTGCAAAGAAGTTTGAGAGAGTGGCAAATCTTTCGTGGTTGTCGAGCATCTCTCAGAACAACATATCTTTGCAATGGAAGGAGCAATCTCGTAAAAAGAAACAAAAGTATGTGTTTGAATTCACTCAAGAAAACCGTTTTCAGAAGTTAATCGAAGTATGTGGAAGAAGACTAGGACCAGAGACTACCCTTGAATTGTTTGCTAAACTGGGACGAGAACCAGGTGTGAAAGGATACAATGCATTGGTAGAAATGTGTATAGATAAAGCCAGGAGAACTAATGCTGAAGACATTGCAATAGAAGAACTTGGGAAGGTTTTTAACCTTTTTAAGTCAATGAGGGAACAAGGTTTAGAGCTACAAGAGCAAACATATCGGCCCCTTCTTTTGTATATAATTGATAAGCACATGGTTGAGGAGTTTCAGTTACTCTGTGTTATTATCAAAGAGGAGAATCCCAGTTCAGTTACAAGGCTGGGTTATTATGAAATGTTGCTGTGGTTGAGAGTTAATAATGAAGAAAAGATTCAGGGTATTTGTAATTATATTGCAGAGAATGACAGTGAGGACATGTCTGATATACGAGAAAATTATTTATTGGCTCTTTGTGAAAGTGAACGGACAGAGGAGATTTTGAAGCTGTTGAGAATCATAGACATAAAATACCTTTCATCTGTTGAATCTGTGGCAATGGTATTTCAGGCATTAGGAAGATTACTATTGGAACCTGTAGCAGAGAAGTTCCTTTTTGACTTCAAAAATAGTGACAAAGAGGCATTTGTAGGTTATCATCTACAGTGTGCTAAAGTGAATTACCAGATTGAGGATGTCATAAAAAAGTTCAAAGATTTGCACCAAAGACTAGAAGTTTTGCCTTCATCTTCATCATATGAGAAGATCATTTTACATAGCTGTGAATTGCACAAGGTACATGTAGCACTTGATATTGTCAATGAAATGTGTGAAGCGGGCTTGACTCTATCAACTGAGGTGTTACACTCAATATTACAAATTTGTCATGAAACATCTGAACATAATTTGGTATGA 1329 0.3845 MQLRHSCVRNLSTGFRSRSATKPATSNPQPSSSSSPTSSTSLLLSGLDEDITLSSLKLKRPSPSGDSANGVFKHISSIFHAGKSVLKPDYDEIDVAKKFERVANLSWLSSISQNNISLQWKEQSRKKKQKYVFEFTQENRFQKLIEVCGRRLGPETTLELFAKLGREPGVKGYNALVEMCIDKARRTNAEDIAIEELGKVFNLFKSMREQGLELQEQTYRPLLLYIIDKHMVEEFQLLCVIIKEENPSSVTRLGYYEMLLWLRVNNEEKIQGICNYIAENDSEDMSDIRENYLLALCESERTEEILKLLRIIDIKYLSSVESVAMVFQALGRLLLEPVAEKFLFDFKNSDKEAFVGYHLQCAKVNYQIEDVIKKFKDLHQRLEVLPSSSSYEKIILHSCELHKVHVALDIVNEMCEAGLTLSTEVLHSILQICHETSEHNLV 442
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Spst5g00983 442 Gene3D Tetratricopeptide repeat domain 136 442 IPR011990 GO:0005515
Spst5g00983 442 PANTHER OS02G0132600 PROTEIN 26 442 - -
Spst5g00983 442 MobiDBLite consensus disorder prediction 1 42 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Spst5g00983 Spst-Chr5 9505140 9509837 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Spst5g00983 - - vun:114184098 615.535
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Spst5g00983 5 9505140 9509837 Spst5g00983 5 9505140 9509837 ECH