Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Spst5g00977 ATGGACGAGCTACTCGTAGCAGTACTCTCGATGCTTCTAGTCGTTGCGTTGATCCCACTCTACCTATGGAAACGCCGTCAGGATTCTCAACCTCCACCTCACCGCGACGAACCTCCTCAGGCTCCGCTGAGAGAAACCGTGGTGCGCTCCACCGCCACTCGTCGCATGCGTCGCCGACCTGCGGCGTCTGGAGCTAGCACGTCGGCAGATGCACCTGCTACGCTAGAAGAATCTGCTGGTGAGAGTGACGATGAAGCTGCTGGTGGAGGTTATTATGAGGCTAAAGCATCAAAGAAAAAGGAAATCAAAAGGCAAGAGAGGGAAGCACGGCGTCAGGCCGATGAATCTGCACGAGAGTCAAAGCAGGCAAAACAAGATCGTTATTCGGAAATGCGGAGGTTGAAGGATGAGGAGCATGAGGCACAGGAGCGTAAGTTGGAAGAAGAAGCCAAAGCTCAGAAGGCTAAGGAGGAGGAGGCTGCTGCATTAGAATTTGAGAAGTGGAAAGGTGAATTTTCGGTTGATGACGAAGGTACCCTTGAAGAAGTGCAAGATAGTGTTGAAGACTTGCTAGCCAATTTTGTTGAATATATAAAGAAGCACAAATGTGTTCCCTTAGAAGATCTTGCTGCAGAATTTAAATTGCGAACACAGGAATGTATCAATCGCATCACATCTCTGGAAAGTATGGGTCGGCTTTCTGGTGTTATGGATGACAGAGGGAAATTTATTTACATCTCCCAAGAAGAGATGAAAGCTGTTGCTGATTATATTAAGCGGCAAGGGAGGGTTAGCATTTCCCACTTAGCAAGTAAATCAAATCAGTTCATCGATTTAGAGCCTAAAGCGCAGTACACTGAGGGCATTAATATTGGGGACGAGATCACTGTCAACTGA 897 0.4771 MDELLVAVLSMLLVVALIPLYLWKRRQDSQPPPHRDEPPQAPLRETVVRSTATRRMRRRPAASGASTSADAPATLEESAGESDDEAAGGGYYEAKASKKKEIKRQEREARRQADESARESKQAKQDRYSEMRRLKDEEHEAQERKLEEEAKAQKAKEEEAAALEFEKWKGEFSVDDEGTLEEVQDSVEDLLANFVEYIKKHKCVPLEDLAAEFKLRTQECINRITSLESMGRLSGVMDDRGKFIYISQEEMKAVADYIKRQGRVSISHLASKSNQFIDLEPKAQYTEGINIGDEITVN 298
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Spst5g00977 298 Coils Coil 92 126 - -
Spst5g00977 298 SUPERFAMILY "Winged helix" DNA-binding domain 185 254 IPR036390 -
Spst5g00977 298 MobiDBLite consensus disorder prediction 27 158 - -
Spst5g00977 298 Coils Coil 180 200 - -
Spst5g00977 298 PANTHER DDRGK DOMAIN-CONTAINING PROTEIN 1 97 284 - -
Spst5g00977 298 SMART DDRGK_2 94 278 IPR019153 -
Spst5g00977 298 FunFam DDRGK domain-containing protein 1 189 246 - -
Spst5g00977 298 Coils Coil 131 166 - -
Spst5g00977 298 Gene3D - 189 246 IPR036388 -
Spst5g00977 298 Pfam DDRGK domain 96 277 IPR019153 -
Spst5g00977 298 MobiDBLite consensus disorder prediction 94 158 - -
Spst5g00977 298 MobiDBLite consensus disorder prediction 28 42 - -
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Spst5g00977 K23344 - gmx:100806336 400.593
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Spst5g00977 5 9380815 9387288 Spst5g00977 5 9380815 9387288 ECH