Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Spst5g00752 ATGGAGCATTCTCTGAATCCTTCCACGGGAAAAGCGGTGTCTGGCAGTGCCAATGAGGAAAGCGGATGGACTTCTTACTTTGAAGATTTCTCTAAGGGGATGGAGCAGCAAAGTTACTGTTCAAGCTTGGGAGGGTCCTCTTTGGTCTCAGATGCTTCTTCTTCTGCTGCATGGAAACTCTCACATCACAATCACCTTCTCTCCTACCCTCCTGTTAGAGTTAGGGACACATCAACTAATGTGTCTAAGAAACTTCGTTTCAAGAAAACAAGAACCCAACAGATATCAGATGATGATCCTTTGGAAGACACTGCTAGCTCCCCTGTCAATAGTCCCAAGGTAGGGGACTTGAAAATTTCCAGCAAGATTGATGAACAACTTGATGGTTCTACTTCTAGGGGTAAGGGATTTCACTTAGAGCATTATCCAAAGCTTCTGCAGACTGATGAGTGTGACATAAATTTTAATGCAAACAATGTTGAGTGCACCACAGACTTGAAGAAAAGGGGTCTATGCCTTGTTCCTTGGTCCATGTTGGTTAATTATTATGGGTGA 555 0.4342 MEHSLNPSTGKAVSGSANEESGWTSYFEDFSKGMEQQSYCSSLGGSSLVSDASSSAAWKLSHHNHLLSYPPVRVRDTSTNVSKKLRFKKTRTQQISDDDPLEDTASSPVNSPKVGDLKISSKIDEQLDGSTSRGKGFHLEHYPKLLQTDECDINFNANNVECTTDLKKRGLCLVPWSMLVNYYG 184
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Spst5g00752 184 MobiDBLite consensus disorder prediction 83 115 - -
Spst5g00752 184 MobiDBLite consensus disorder prediction 1 20 - -
Spst5g00752 184 MobiDBLite consensus disorder prediction 99 114 - -
Spst5g00752 184 PANTHER VASCULAR-RELATED UNKNOWN PROTEIN 1-RELATED 1 184 IPR039280 GO:0010089
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Spst5g00752 Spst-Chr5 6588963 6589737 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Spst5g00752 - - gmx:100799390 285.804
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Spst5g00752 5 6588963 6589737 Spst5g00752 5 6588963 6589737 ECH
Spst5g00752 5 6588963 6589737 Spst11g01092 11 35246478 35247270 PCT