Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Spst5g00662 ATGGACACCACCACCACTTCTTCTTCTTCTTCATCTTTGTCACCGTCGTCATCATCATCTCATATCACCACTCTCCACCCCGACATCATTCAATCCCACATCCTTAATCGCCTCGATGGCCCCACTCTCGCCTCCGCATCCTCCTCCACCCTCCACCTCCGTCGTCTCTGTACCGACCACCACCTCTGGCAGAACATCTGCGCCTCCACCTGGCCCTCCCTCAACCACCCACGCACCGCCGCCCTCATCGCCACCTTCCCCGCCGCCCACCGCTCTGTTTTCTCCGACTCTTTTCCCTCCCTCCACCACTCCGCTCATCCCCAACCCAACCCAACGCCGATGCCGCCGGAGTTCGTCTCTGCCGTCGACCTCTACTACAAGGGCAAACCTTTCTTTTCGCGCGTCATCACAACCGAAACCCACAAGGGCTGGTTCCTCTCCTCCCCGCTCTGGGTGGACCTCCTCGATGCCAACGAGGTGGTTCCCACTCCCTTGAAATTCGCGCTGCGCGACGAAGAATCTTCGTGGCTGGCCCACCTCGAGGAGAACCTCGGGCTGAGCTGGATCGTCATCGACCCCAGCCGGAAGCGCGCGGCGAACGTCTCGAGCCGGAGGCCGGTGGCTGCGCGGCGGCACTGGCTGACGGAGGAGCTGGAGGTGCTGTTCGCGGTGGCCATGGAGACGGTCCAGTGCGTTATCAAAGTCACGTGCTGCGGGAAGGCCGGGGGCGCGATGCACGTGAGGGAGGTGAGTCTCGCAATGGAGGACACGGAGGGGAGGCACGTGATGGGCAGGGACAGCTTCGTCATTTTGCAAGACGCCATGAAGAACGGTGAGAGAAGAAAACCGGACCCCAAAGAAGCCAAAGCAAGGTTCGAGAAATTCTGCCGCGTGAAGAGAGAGACCAAAGAGAAAAAACTAAGGAGAGACAATGCAATGGACATGGTTGCCATGTTGGTCGCTTTTACCGTTTTCGTTTTGCTCTTTTGGTTCATGGTCTTTGGTTTTTGA 1011 0.5885 MDTTTTSSSSSSLSPSSSSSHITTLHPDIIQSHILNRLDGPTLASASSSTLHLRRLCTDHHLWQNICASTWPSLNHPRTAALIATFPAAHRSVFSDSFPSLHHSAHPQPNPTPMPPEFVSAVDLYYKGKPFFSRVITTETHKGWFLSSPLWVDLLDANEVVPTPLKFALRDEESSWLAHLEENLGLSWIVIDPSRKRAANVSSRRPVAARRHWLTEELEVLFAVAMETVQCVIKVTCCGKAGGAMHVREVSLAMEDTEGRHVMGRDSFVILQDAMKNGERRKPDPKEAKARFEKFCRVKRETKEKKLRRDNAMDMVAMLVAFTVFVLLFWFMVFGF 336
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Spst5g00662 336 Gene3D - 7 106 - -
Spst5g00662 336 PANTHER F-BOX PROTEIN-RELATED 17 331 IPR045283 -
Spst5g00662 336 SUPERFAMILY F-box domain 9 80 IPR036047 GO:0005515
Spst5g00662 336 MobiDBLite consensus disorder prediction 1 22 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Spst5g00662 Spst-Chr5 5676743 5677753 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Spst5g00662 - - gmx:100794825 497.664
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Spst5g00662 5 5676743 5677753 Spst5g00662 5 5676743 5677753 ECH
Spst5g00662 5 5676743 5677753 Spst11g01174 11 36063995 36066726 PCT