Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Spst5g00644 ATGGATTCTCACTTCCCCACCTATCTTTTTACTAATTGTAATCAGATGCTTTTCAGCATCATTGAGACCTCCATCAACACCTTAGTGAGAGAGGGTTCTGTTCTGGTTAGGTTACGCTGTATTCAGCACAGTGACAATAACATGGAAGCTTCCAGACTCAGTAACAGTTCTCAAAACATTCGATGCCATCACTGCGCAGGACCCCTTTCAAACCGCATGGAAACTAGTCAATGGACCGTTTCGCCTCTCATCAGGGATAGCTTCTCTATGATTGGTTCTGCTGTTGGCGGCACGGCAAGTGCATTTTATGGATTCAATCTTGTTATGCCGATTGTTCAGAGAAGAATAAAAGGACCCATGTGGCTGCATTTTCTCATTGGTGCACCCCCTGTGATAGTATTCTCTTCAGCATGTGCGGGACTCGCAGGTGGGGCTGTTCCTGCTGCTGCACAACTTGTTTCCTCCTCTTATCATGCGGCATACTCATCTCCTACCGCACCGCCGCCGTCAAAGGATAAACACATTTAA 528 0.4659 MDSHFPTYLFTNCNQMLFSIIETSINTLVREGSVLVRLRCIQHSDNNMEASRLSNSSQNIRCHHCAGPLSNRMETSQWTVSPLIRDSFSMIGSAVGGTASAFYGFNLVMPIVQRRIKGPMWLHFLIGAPPVIVFSSACAGLAGGAVPAAAQLVSSSYHAAYSSPTAPPPSKDKHI 175
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Spst5g00644 175 PANTHER OS01G0264500 PROTEIN 44 175 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Spst5g00644 Spst-Chr5 5541482 5547850 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Spst5g00644 - - gmx:100787081 221.861
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Spst5g00644 5 5541482 5547850 Spst11g01195 11 36273345 36276047 PCT