Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Spst5g00550 ATGGCCACCAACATTCGCAGAGCGCCTTATCGCTTTCTTCCTTCCGTCAATAGAGATTCGCTCTCCGATTCCACCTTCGAATTCGACGAATCCGATCTCTATAACTCCGCACGCGCTAACTCTCCTGAATTCCGCAAATCCGTACGCGCATCCAGATTCCATAATAACTCCTCTTCCTCTGGCGGCCGCGACGGTGCTCCGGCGTCGCTGCCGGTGAACGTGCCGGACTGGTCAAAGATCCTCGGCAACGAGTACGGACAGAACAGGAGGCGGAGTGACGACGATGAAGCGCTGAGCGATGAGGAGGACGAAGCAGGGAGAGTGCCTCCCCACGAGTTTCTGGCGAAGACGAGAATCGCATCGTTGTCGGTGCACGAAGGAGTTGGGAGAACTCTCAAAGGACGCGATCTTAGTAGGGTTCGAAACGCGATTTGGGCGAAAACGGGATTCCAAGACTAG 459 0.5556 MATNIRRAPYRFLPSVNRDSLSDSTFEFDESDLYNSARANSPEFRKSVRASRFHNNSSSSGGRDGAPASLPVNVPDWSKILGNEYGQNRRRSDDDEALSDEEDEAGRVPPHEFLAKTRIASLSVHEGVGRTLKGRDLSRVRNAIWAKTGFQD 152
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Spst5g00550 152 PANTHER EMB|CAB72159.1 10 152 - -
Spst5g00550 152 MobiDBLite consensus disorder prediction 37 112 - -
Spst5g00550 152 Pfam Senescence regulator 40 152 IPR007608 -
Spst5g00550 152 MobiDBLite consensus disorder prediction 1 22 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Spst5g00550 Spst-Chr5 4482212 4482670 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Spst5g00550 - - gmx:100814909 242.662
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Spst5g00550 5 4482212 4482670 Spst5g00550 5 4482212 4482670 ECH
Spst5g00550 5 4482212 4482670 Spst11g01357 11 38086392 38086889 PCT