Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Spst5g00546 ATGATGATTGAACAAAAGATAATTGATAATTTGCTACTTCTTCCTTTTTTTAGTCTGAGAGATCAAGCCCAGGTTGAGCAATTGTTACGATACATTATTGAAGAACCACCAGAAGATGCTGAAAATAAACGAGCCTTCAAGTATGCAGCTGTTGTTGTTTGCCTAATGATTCGAAAGACAGTTCCACTGATGAATTATGTTCAAGCCCATCAGAATGTCTTCCGTCAATTGGTTGATTTGATAGGAATTACATCCATTATGGAGGTTTTGGTTCGACTAGTAGGTGCTGATGACCATGTCTATCACAATTTTATAGATGTGATGCAATGGTTGGCTGAGAGCAACCTGCTTGAGATGATTATTGATAAGTTGAATCCATCTAGTCCTCCTGAAGTTCATGCCAACGCCGCTGAAACATTGTGCACAATAACTAGAAATCCCTCATCTACTCTAGCAATTAAACTTTCAAGCCCAAGTTATGTTGCAAAAGTATTGGACCATGCATTGGAAGATTCACAGTCAAAGTCTAGCCTTGTGAACTCACTTTCAGTGTGTGTTTCTTTGTTGGATCCCAAAAGATCTGCTATGTCATCTCCCCTTTTTCATTCCTTTCGAAGTCAACACATGTATGAACCACCAATTCCTGTAAACCCAGACACTATTGGTGCAATGCTACCTAAACTCAGTAAATTGCTTATGCTTTTGAATGTATCATCTGATGAAAAGGTGTTGCCTACAACATATGGAGAATTGAGACCTCCACTTGGGAAGCATCGATTAAAGATTGTTGAGTTCATTGCTGTCCTTCTGAAAACTGGAAATGAAGTGGCAGAAAATGACTTGCCGACAGTAGTTGCTGCAGGAAAACAGGCACCACGGGCAGGGAACATTGGGCATATTACTCGAATTGTTAACAAACTTGTTCAACTGGCACACAGTCGAAGCCTCGTACTAACTTGTCTTCAGGAAAATAGTGAGTGGAATGAGTGGCAAGCTTCAGTTCTTCAGGAGCGTAATGTGGTTGAGAATGTTCACCGTTGGGCTTGTGGACGGCCGACTGCTTTACAAGATAGGATGAGGGACAGTGATGATGATGACCTTCATGACAGGGACTATGATGTCGCAGCTTTAGCCAATAATTTGAGCCAGGCTTTTAGATATAAACTTTATGGAAATGAGGATAATGAAGAGGAACGTGCCAACCTTGATCGAGATGATGAGGATGTCTACTTTGATGATGACTCTGCTCAAGTAGTCATATCATCCCTCAGACTCAGTGATGATCAGGGGAGTAGTCTGTTTACAAACTCCAACTGGTTTGCATTCCAAGATGACAGAATTGGTGATGCATCTGGGGGCACAACTTCGTCGGAGATGATGGATGAGATAAACTTGAATGGTGCTGCAAATGGTGGTAGCAGTAGTGATGACGAGGTAGTGGTTGGAGAGGATGACGAGTTGGCTGAAAATAATCTCAATGGTACATCTAGCTCAAGCACAAACATAAATGGAATAATGACTGGTAGTGATTCCATGAATGGAGACACCTTGAACTTTGAAAACAAAAAGGCAAGTGCTTCACATGATTTGGGATTCTTCAGGTTTGAGGCATCGGACAATGAAGAGTTGTTTGGGGACAGGCCTTTGCCTGATTGGGTGGGATGGGGTGAACCTTCAGATGTTCAAGATACCGGCTCAAGCATGAATCCATTTGTGGACCATGATGATTCTTCTGGTAACAACCTCTCTACCAAACCTCAAATAGGTAACCCAAATCCTAGTCCTCCTTCAAATGGAGACTCTGTTCTTTCAAACAGATCACTATCCCCTAAAGATTCAATTGATGGGTGTGTTGACACAAGTCAAAGATCAGTAGCAGTACCATCACTCTTTGAAGAAGATGTTGAATTTGTAGGTGTAGAATTAGAAGGTACCGAGAAGGCTATGGAACACGCTTTGAAAGAAGGGATAGTTGGGGAGGCAGGACCATTGAAAAGAAACATGGTCTCTAAAGTGCCACCAGAAAAAGAAAGTTCCGATGAGGGTGGCCCTGGAATAAAGGAATTTAATAATGCAAATTATTGGAGGGTTGACCAGGAAGTTGCTGTTCTTGAGTGA 2118 0.4178 MMIEQKIIDNLLLLPFFSLRDQAQVEQLLRYIIEEPPEDAENKRAFKYAAVVVCLMIRKTVPLMNYVQAHQNVFRQLVDLIGITSIMEVLVRLVGADDHVYHNFIDVMQWLAESNLLEMIIDKLNPSSPPEVHANAAETLCTITRNPSSTLAIKLSSPSYVAKVLDHALEDSQSKSSLVNSLSVCVSLLDPKRSAMSSPLFHSFRSQHMYEPPIPVNPDTIGAMLPKLSKLLMLLNVSSDEKVLPTTYGELRPPLGKHRLKIVEFIAVLLKTGNEVAENDLPTVVAAGKQAPRAGNIGHITRIVNKLVQLAHSRSLVLTCLQENSEWNEWQASVLQERNVVENVHRWACGRPTALQDRMRDSDDDDLHDRDYDVAALANNLSQAFRYKLYGNEDNEEERANLDRDDEDVYFDDDSAQVVISSLRLSDDQGSSLFTNSNWFAFQDDRIGDASGGTTSSEMMDEINLNGAANGGSSSDDEVVVGEDDELAENNLNGTSSSSTNINGIMTGSDSMNGDTLNFENKKASASHDLGFFRFEASDNEELFGDRPLPDWVGWGEPSDVQDTGSSMNPFVDHDDSSGNNLSTKPQIGNPNPSPPSNGDSVLSNRSLSPKDSIDGCVDTSQRSVAVPSLFEEDVEFVGVELEGTEKAMEHALKEGIVGEAGPLKRNMVSKVPPEKESSDEGGPGIKEFNNANYWRVDQEVAVLE 705
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Spst5g00546 705 MobiDBLite consensus disorder prediction 489 508 - -
Spst5g00546 705 PANTHER SIT4 YEAST -ASSOCIATING PROTEIN-RELATED 13 50 IPR007587 GO:0019903|GO:0043666
Spst5g00546 705 Pfam SIT4 phosphatase-associated protein 54 280 IPR007587 GO:0019903|GO:0043666
Spst5g00546 705 MobiDBLite consensus disorder prediction 664 690 - -
Spst5g00546 705 MobiDBLite consensus disorder prediction 547 618 - -
Spst5g00546 705 MobiDBLite consensus disorder prediction 560 618 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Spst5g00546 Spst-Chr5 4430247 4436922 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Spst5g00546 K15501 - gmx:100777597 701.049
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Spst5g00546 5 4430247 4436922 Spst5g00546 5 4430247 4436922 ECH
Spst5g00546 5 4430247 4436922 Spst11g01348 11 37989757 38000174 PCT