Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Spst5g00501 ATGGACAACCAGCGTAGCTCTCTTATAAGTTGGGCTAACTACTTCCAAGGAAAGTCAATGGAGGAGCTGAGGCAGTCTATCATATACTTAACTGTGGAGCTGGAACAAACAAGGGCTGCAGTGCAAGAAGAGCTCAGAAAGAGGGATGACCAACTACTCAACCTAAAGGAACTCCTCAGCAAAACCATGAGAGAGAGAGACGAAGCACAAGAGAAAAGCCAGAGACTTCTCCTGGAGAAGATAGTTTTCCAACAGCAACAACAAGCGGCTCCTGTGTCTGGAATTTCTAGCATTGAGGATGAGCCAAGAAGAGGAATCGACTCCAACAATGGCCTCTCTTCATCAGATTGTGAAGAGAGCATTGTTTCCTCTCCAGTCATTGACCATTTGTCTCATCATAAACTCCAATTACCACCACAACCTCAATTACCACAATCCATGATTGAACTAACACCAGACAAACCATTACCAGAAAAGGGTAAGCTCTTGCAAGCAGTGATGAAAGCTGGTCCTCTCCTTCAGACCCTTCTCCTAGCAGGACCTCTTCCTCAATGGAGACACCCTCCTCCACCACTTGAGTCCTTTGAGATTCCCCCTGTCACCATACCTTCACCACCACAACCACAACTCCTCCACCAAGATTCCTTTCATAACACTAACGGTAGCAGCACCACAACCAACTGCGGAAGGGTTAGTCGAAAAAGGGTCTTCTGTGATGGTTCTGATTCTCCCACCGAGACCAAGTACCAAAGGCTTGTACTTCACTGA 768 0.4674 MDNQRSSLISWANYFQGKSMEELRQSIIYLTVELEQTRAAVQEELRKRDDQLLNLKELLSKTMRERDEAQEKSQRLLLEKIVFQQQQQAAPVSGISSIEDEPRRGIDSNNGLSSSDCEESIVSSPVIDHLSHHKLQLPPQPQLPQSMIELTPDKPLPEKGKLLQAVMKAGPLLQTLLLAGPLPQWRHPPPPLESFEIPPVTIPSPPQPQLLHQDSFHNTNGSSTTTNCGRVSRKRVFCDGSDSPTETKYQRLVLH 255
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Spst5g00501 255 Pfam Protein of unknown function (DUF1635) 18 252 IPR012862 -
Spst5g00501 255 Coils Coil 52 79 - -
Spst5g00501 255 PANTHER ENABLED-LIKE PROTEIN (DUF1635) 11 252 IPR012862 -
Spst5g00501 255 MobiDBLite consensus disorder prediction 92 120 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Spst5g00501 Spst-Chr5 3958016 3958951 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Spst5g00501 - - gmx:100806513 388.267
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Spst5g00501 5 3958016 3958951 Spst5g00501 5 3958016 3958951 ECH
Spst5g00501 5 3958016 3958951 Spst11g01290 11 37313193 37314083 PCT