Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Spst5g00469 ATGCCGGCCCCCAAGAGCAGCCGCAACGGCGGGACCGAGGGTCACCGGCGGGGAAGGTCCTCGTCGTTCCACGGCCAGAGCGCCGCGTCCGTCGGTCAGCTCCGCCGTCCGAAGACGGTTCCTGACCTCCTGTCCCTCAGAAGCCTTGCTGGAACGGCGCCGGAAGGTGTGCCGAGACAGCCGCCGAAGATGCTGTTGAAGGTAAGCGTGCTGAGAAGCCTCGCTCCCGTGCAGGTGCTGATGACGCCGGAATCCACCGTCGGCGACCTGATAGCGGCGACGCTGCGACAGTACGTGAAGGAAAATCGACGCCCAATCTTGCCGGCCAACTCAACCTCCGATTTCGACCTCCATTACTCACAGTTTAGTCTAGAAAGTTTGGATAGAAAGGAGAATCTTATGGAGCTTGGATCAAGGACCTTCTTTCTGTGTCCGCGAAAGACTGGCACGGCCTTGGAAGGTAGCGTAACGGCGCCGTTTGCGTCTTGTGCCAAAGAAGCGAAAAACGAGAGGGAGAGGTGTGGTGGTGGTGGTGGTGGTAGTGCTTTTGCTTGGTTCAAACTCATGCAATTCATGATGTAA 582 0.5825 MPAPKSSRNGGTEGHRRGRSSSFHGQSAASVGQLRRPKTVPDLLSLRSLAGTAPEGVPRQPPKMLLKVSVLRSLAPVQVLMTPESTVGDLIAATLRQYVKENRRPILPANSTSDFDLHYSQFSLESLDRKENLMELGSRTFFLCPRKTGTALEGSVTAPFASCAKEAKNERERCGGGGGGSAFAWFKLMQFMM 193
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Spst5g00469 193 PANTHER BNAC05G50380D PROTEIN 19 164 IPR040358 -
Spst5g00469 193 MobiDBLite consensus disorder prediction 1 36 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Spst5g00469 Spst-Chr5 3704489 3705296 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Spst5g00469 - - gmx:100786612 289.656
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Spst5g00469 5 3704489 3705296 Spst5g00469 5 3704489 3705296 ECH
Spst5g00469 5 3704489 3705296 Spst11g01240 11 36800184 36801892 PCT