Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Spst5g00463 ATGGCGGAGAAAGCGATGCTTAAGAGGCTCAGTTCATCTCTCTCTAACAGAACACCAAACACAAAACTAAACTATGTCGCTGTTAGTTCATCTGAGTCTCTGAGTATGGCAGAATCATCCACCAGTTCTGGTGTTTCAGTTGATCCCAATTCCAGTGACAACAACAGGTTGTGGAAAGGGGCATTTGCTGTCGCTGGAATCATGGTTACCCTCGTCACCTATGGTCTCTTGCAGGAAAAGATCATGAGAGTATCATATGGGGCAGAAAAAGAGTATTTCAAGTATTCACTGTTTCTTGTTTTCTGCAACCGCATCACAACATCTGCTGTTTCTGCTGGTTCTTTGCTGGCAAGTAAAAAGGCGATGGACCCAGTAGCTCCCATTTTTAAGTATTGCTTTATCTCGGTATCAAACATACTAACTACAACATGCCAATATGAGGCCCTCAAATATGTTAGTTTTCCTGTTCAGACCCTTGCAAAATGTGCAAAAATGATACCAGTTATGGTCTGGGGTACCCTCATCATGCAGAAGAGATATCATGGACCTGACTATTTGTTGGCTTTTTTAATTACCCTTGGCTGCTCAGTATTTATCCTGCATCCGGCAGGAACAGACATAAGTCCATACAGTAGAGGAAGGGAAAATACAGTTTGGGGTGTTCTCCTAATGGTTGGCTATCTTGGGTTTGATGGCTTTACAAGCACTTTCCAAGATAAGCTGTTTAGAGGCTATGACATGGAGATACATAATCAGATATTTTACACAACATTATGTTCTTGTATTCTTAGCCTGACAGGTCTTATCTTACAAGGGCATTTAATACCTGCAATAGAATTTGTTTATCACCATCATGATTGTTTCTTTGACATAGCATTGCTTTCAACTGTTGCAACAATTAGTCAATTTTTTATTTCCTACACAATTCGAACTTTCGGTGCTCTGACATTTGCAACCATAATGACCACAAGACAGTTGGTGAGCATTATGCTGTCATGTGTGTGGTTTGCCCATCCTCTTAGCTGGGAACAGTGGATTGGAGCTTTTGTTGATCGTCCCGAAAACCCTATCATTGTGAATAACAACTTTGAAGAAGCCATTGATGTTTTATGCCAGCAAAAGCGCGTCGATGAAGCTGTGCAGTTGCTCCATTGCATTGATCATCGACCCTCTGCGCGCGTGTATTCCACTCTCAACGCCGCTTGTGTTTGCCACCGCGCTCTCGAATTGGGTGTTCGAAGAAATTCCCATACCATAAATGAAACTCATGGGCAAGAAAGGAGGCGAAAAAGATTGGAGTCTGTGTCTCGAGCTCCAATATCATTGAGGGAAGAAGTCACGAGAAAAACACAAACCAAGCCAACCACTAACACCAAGGTCAAATTGAGATTTGATCACTTGAAAAACCTTGCAGTGTGGGCCACCACCAACGACCATCTCAGATTGTCTTTGGCTGCCTTTTATGGACACCAATTCGCGTCCTTTGGAGAGGCCAATGGGGTACCACCTGGTTCTTCTCTAATGACTTGCCAAAGGTTTGGTTTGCTCTATCCCTGTTTCAGTTTTGCTTACCTTTTTTATCCTTGTCCTTCAATGCCTTTTATTTAG 1608 0.4254 MAEKAMLKRLSSSLSNRTPNTKLNYVAVSSSESLSMAESSTSSGVSVDPNSSDNNRLWKGAFAVAGIMVTLVTYGLLQEKIMRVSYGAEKEYFKYSLFLVFCNRITTSAVSAGSLLASKKAMDPVAPIFKYCFISVSNILTTTCQYEALKYVSFPVQTLAKCAKMIPVMVWGTLIMQKRYHGPDYLLAFLITLGCSVFILHPAGTDISPYSRGRENTVWGVLLMVGYLGFDGFTSTFQDKLFRGYDMEIHNQIFYTTLCSCILSLTGLILQGHLIPAIEFVYHHHDCFFDIALLSTVATISQFFISYTIRTFGALTFATIMTTRQLVSIMLSCVWFAHPLSWEQWIGAFVDRPENPIIVNNNFEEAIDVLCQQKRVDEAVQLLHCIDHRPSARVYSTLNAACVCHRALELGVRRNSHTINETHGQERRRKRLESVSRAPISLREEVTRKTQTKPTTNTKVKLRFDHLKNLAVWATTNDHLRLSLAAFYGHQFASFGEANGVPPGSSLMTCQRFGLLYPCFSFAYLFYPCPSMPFI 535
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Spst5g00463 535 Pfam UAA transporter family 61 349 IPR013657 GO:0055085
Spst5g00463 535 PANTHER SOLUTE CARRIER FAMILY 35 MEMBER B 52 349 IPR013657 GO:0055085
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Spst5g00463 Spst-Chr5 3645230 3655945 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Spst5g00463 53 350 Organic Solute Cotransporters AT5G59740 81.879 0.0 526
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Spst5g00463 K15276 - gmx:100782989 593.964
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Spst5g00463 5 3645230 3655945 Spst5g00463 5 3645230 3655945 ECH
Spst5g00463 5 3645230 3655945 Spst2g02275 2 21896994 21901451 PCT