Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Spst5g00460 ATGTCTTGTGGCATGCACAACGAACACGCCAAGCGTCGAGCCAGAATTCGAACGGCCATGCGAGGCTCTCAATTGCGTAAGGGTAAACCTTTGAAGGTGCACAACACCATTGACAAAGCAAAGCCTCTTAGATTGCTTGCACATGTAATCACGTACATTGCATGTGAAGAGCCGCAGGAAGATAACACTTTTGTTCTCCCATTCTCTCTGCATCTTTTCTTTCACAACATAACCATGGAAGATCCCTTGGGTTCCATACTCAATTTTCACCAGAGTTGTGATGAGTTGAAGCAAAATCTCTTGGCCACCACCCTGGAGCTGGAGACCATGAAGAACGTGAACAAGGAACTGATAAATCAATTGAAGATGGCTTACAAAGAGAGGGACGAAGCAAGAGAAGAACTTCAGAAACTGGTGAAAAAACTAACATCCCCCACTCTGGTTGAAAAGATGATTCCAACACCAACCAAATCGAGCATCACAGAATCCAACAGCCCATCGCACGTTTCCTCCCCCGTAGATTCCCTTCTCGACGCTGTTTCTCCTCGGGAGTTCTCCAACTTGAACATCATTGTGGACTCACACAACAACATGGCTTATCATCTCAAACAACCTTTGGTTCAAAACACGAGGGTCTCTCAGAGGCGCACGTGCGATGTTGGGGACGAAGTGATCGAACACCTTGCCAAGAGAAGAACTTTGCCCCAAAAGGGTATGCTCCTAAAGGCTGTGGTGGATGCGGGTCCCTTGCTTAAGACTCTCCTTGTTGCGGGCCCACTTCCCACGTGGCGAAACCCCCCTTCATCGCAGACCATAGAGACTCCATGCCTCAATGTTCAAGACATTGGTTCCAATAATGTTAATACGTTCAATTCACTTCAGAAACCAACGCTTGCATTTGCATCTTCTCGTTCTTTGCAGCCATCTGTACTCAATGTTTCTGTTTCGAACAACAATGCATTGCAGATGGGTTCAAATGCTACTTGCAAGAACCTTGCCCCATCAAGGATTCCACAGGGCCATCAGTATCTTCTATGA 1038 0.4672 MSCGMHNEHAKRRARIRTAMRGSQLRKGKPLKVHNTIDKAKPLRLLAHVITYIACEEPQEDNTFVLPFSLHLFFHNITMEDPLGSILNFHQSCDELKQNLLATTLELETMKNVNKELINQLKMAYKERDEAREELQKLVKKLTSPTLVEKMIPTPTKSSITESNSPSHVSSPVDSLLDAVSPREFSNLNIIVDSHNNMAYHLKQPLVQNTRVSQRRTCDVGDEVIEHLAKRRTLPQKGMLLKAVVDAGPLLKTLLVAGPLPTWRNPPSSQTIETPCLNVQDIGSNNVNTFNSLQKPTLAFASSRSLQPSVLNVSVSNNNALQMGSNATCKNLAPSRIPQGHQYLL 345
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Spst5g00460 345 MobiDBLite consensus disorder prediction 1 21 - -
Spst5g00460 345 PANTHER ENABLED-LIKE PROTEIN (DUF1635) 83 325 IPR012862 -
Spst5g00460 345 MobiDBLite consensus disorder prediction 155 174 - -
Spst5g00460 345 Pfam Protein of unknown function (DUF1635) 91 295 IPR012862 -
Spst5g00460 345 Coils Coil 93 141 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Spst5g00460 Spst-Chr5 3632696 3637493 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Spst5g00460 - - vum:124830826 452.21
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Spst5g00460 5 3632696 3637493 Spst5g00460 5 3632696 3637493 ECH
Spst5g00460 5 3632696 3637493 Spst2g02272 2 21890925 21892966 PCT