Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Spst5g00418 ATGGGAGGCGCGTGTAGCAGCAACGCCTTCGCCGCGGTGCAGTTATCGATATCCAGATTCAGAAGCAACCGCACCGTTTCTTTGTTCTCGGTTCGAGCCTGCGACGACCCTCCTCGTGGCCCATCCTGCATATACGTTGGCCCCCTTCACACCGCCACCAAAGAAACCCTCGAAGCTCTTTACTCTCAGGCGCGGGATGCGTATTACAGTGGAGAGCCTTTGATACTCGATGACATGTTCGATAGAGTAGAGTTGAAGCTTAAGTGGTATGGTTCCAAGTCAGTTGTCAAGTACCCTCGATGCAGTATCCGGAGGCATTCCACATATGCTGATGCTGACGAAGATCTGTCTTTGGCTTTTTCATTAGCAAGCTTATGGTCCCTATTTCTTGCACTTGGCTGTTCAGCTTGTGTTTGGCCTATATTTTACACTATTACCACAGCTTATCAAAAGGCATTCGACACGGGAGGATTGTCATATGGTAGCCAAGCATCAGGAATAGGGCTTCTTTTTGTGGTCAATAGCATTATCTTCATGGCACTCGGTTTGGTCATTGGCTACCCAGTTGCTTCAGCTTCAGTTAAGGTGCTTCAAGGCCTGTGGATGGGTGATTTAGCGGCACTAAAGGGTTCATGTCCAAATTGTGGAGAAGAGGTATTCGCATTTGTGAAAACGGACAAGGCTGATGCCTCTCCTCATAGAGCAGATTGTCATGTGTGTGAATGCTTATTGGAATTTCGCACCAAAGTTGAGCAATCTGATTTAAGATTAGGCCTGGAATTATCTCCCATCTCATCAAAGCTTTTTGATCAGTCTCAGTCTGTTCGTGACGCCTGGAATATAGGAACAATAGACAATAATTTAAAGGTTTTAAACGAGATGGGTAGCCCCGAGGATAATGAAAACAAGGGCTTTTTCGCTGCCATGACTTCCGGCTTCTCCATCTTCAGCAATGCTATGCACCGATCTGTCAGCGGGTTACTGGGATATGAAGGTGTAGAAGTTATAAATCCAGAGGGTGGAAAAGAGGATGCAGAGGAGGAAGCCCATAGAGGAAGATGGAAACCAGAGGAAAGAGATAGTTACTGGAAGATGATGCACAAATATATTGGCTCAGATGTAACATCAATGGTAACGCTACCAGTTATTATTTTTGAACCAATGACTATGATTCAGAAAATGGCAGAGTTGATGGAGTACTCCTACTTGTTAGATCAGGCAGATAAATGTGACGACTCATACATGCGGATGGTGTATGCATCATCATGGGCTATATCTGTGTACTTTGCATACCAACGGACCTGGAAGCCTTTTAACCCTATCCTTGGAGAGACTTACGAGATGGCTAACCATGGTGGAATTACATTTCTTGCAGAACAGGTGAGTCACCATCCCCCAATGAGTGCTGGCCATGCTGAGAATGAGCATTTTACATATGATGTGACTTCAAAGTTAAAGACTAAGTTTTTGGGAAATTCTGTTGATGTTTACCCTGTTGGAAGAACACGTGTAACCCTCAAGAAAGATGGTGTAGTCATAGATTTGGTTCCCCCTCCAACTAAGGTTAATAATTTGATATTTGGCCGAACATGGATTGATTCACCTGGGGAGATGATAATGACAAACTTGACAACGGGGGACAAAGTTGTACTCTACTTTCAACCATGTGGATGGTTTGGGGCTGGTCGCTATGAAGTAGATGGATATGTTTATAATTCTGCTGAGGAGCCTAAAATTTTGATGACTGGGAAATGGAATGAGTCAATGAATTATCAACCTTGTGATTTGGAAGGAGAGCCTCTTCCAGACACAGAACTGAAAGAGGTTTGGCATGTTGCTGATATTCCACACAATGATAAATTCCAGTATACATACTTTGCGCATAAATTAAACAGTTTTGACACTGCCCCTAGAAAATTGTTGGCATCAGACTCCCGTTTACGCCCAGATAGATATCAACTTGAGATGGGTGATCTATCCAAATCAGGGGCAGAAAAGAGCAGTTTGGAGGAGAGGCAACGCGCTGAAAAGAAAATCCGAGAAGCCAAAGGGCATAAATTCACATCAAGATGGTTTGATTTAACGGAAGAGGTCACATCAACTCCGTGGGGTGATTTGGAGATCTACCAATACAATGGTAAATACACTGAGCATCGAGCTGCTATAGATAACTCAGGCAGCACTGATCATCTTGATAATAAAGAAATTGAATTCAATCCATGGCAGTATGGTAATTTGTGCACAGAATGA 2250 0.4373 MGGACSSNAFAAVQLSISRFRSNRTVSLFSVRACDDPPRGPSCIYVGPLHTATKETLEALYSQARDAYYSGEPLILDDMFDRVELKLKWYGSKSVVKYPRCSIRRHSTYADADEDLSLAFSLASLWSLFLALGCSACVWPIFYTITTAYQKAFDTGGLSYGSQASGIGLLFVVNSIIFMALGLVIGYPVASASVKVLQGLWMGDLAALKGSCPNCGEEVFAFVKTDKADASPHRADCHVCECLLEFRTKVEQSDLRLGLELSPISSKLFDQSQSVRDAWNIGTIDNNLKVLNEMGSPEDNENKGFFAAMTSGFSIFSNAMHRSVSGLLGYEGVEVINPEGGKEDAEEEAHRGRWKPEERDSYWKMMHKYIGSDVTSMVTLPVIIFEPMTMIQKMAELMEYSYLLDQADKCDDSYMRMVYASSWAISVYFAYQRTWKPFNPILGETYEMANHGGITFLAEQVSHHPPMSAGHAENEHFTYDVTSKLKTKFLGNSVDVYPVGRTRVTLKKDGVVIDLVPPPTKVNNLIFGRTWIDSPGEMIMTNLTTGDKVVLYFQPCGWFGAGRYEVDGYVYNSAEEPKILMTGKWNESMNYQPCDLEGEPLPDTELKEVWHVADIPHNDKFQYTYFAHKLNSFDTAPRKLLASDSRLRPDRYQLEMGDLSKSGAEKSSLEERQRAEKKIREAKGHKFTSRWFDLTEEVTSTPWGDLEIYQYNGKYTEHRAAIDNSGSTDHLDNKEIEFNPWQYGNLCTE 749
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Spst5g00418 749 Gene3D - 443 619 - -
Spst5g00418 749 MobiDBLite consensus disorder prediction 656 677 - -
Spst5g00418 749 ProSitePatterns Oxysterol-binding protein family signature. 459 470 IPR018494 -
Spst5g00418 749 PANTHER OXYSTEROL-BINDING PROTEIN-RELATED 304 719 IPR000648 GO:0008289
Spst5g00418 749 FunFam oxysterol-binding protein-related protein 3C 443 620 - -
Spst5g00418 749 Gene3D - 652 741 - -
Spst5g00418 749 FunFam Oxysterol-binding protein-related protein 3C 651 744 - -
Spst5g00418 749 Pfam Oxysterol-binding protein 361 719 IPR000648 GO:0008289
Spst5g00418 749 SUPERFAMILY Oxysterol-binding protein-like 355 731 IPR037239 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Spst5g00418 Spst-Chr5 3326046 3333963 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Spst5g00418 - - gmx:100779808 900.197
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Spst5g00418 5 3326046 3333963 Spst5g00418 5 3326046 3333963 ECH
Spst5g00418 5 3326046 3333963 Spst2g02310 2 22402738 22405180 PCT