Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Spst5g00409 ATGGTTTTGCTGGCCATGTCGGCCGGGGAGAATATGAGGAATGGGGAGTCCCACATGCAGACATGTGAGCTGCACAAGGGATGGTCAGCATCATCAAGATTCCCACTTCATTTTGGGAACATCCATAGGGAGCTAGCCTATACATATACTGACTGTGTTCTCCACCTCTTTCTCCTAAAGCTTGAAGACATAGCAGTAAAAGTCACCCTGAGATCCAACAAACAATGGAGGAGGAAGCAGTGGTGGAAGAAAAGAGGGTTAGTTAAAAGCAGGAGGAGTTGGAGGCACAAGAGAGAAGAGTTGGTCGAGATCAGGAGGGTGGAAGTAGCCATTCTTGGGCGGCTCTCTTTTCCTCCCAAAGGAAAAAGGCTTCTTCTTCGGGGGCGGCGGGGGTGCCAACGCCGTGGGTATGCGGCACTCCCACCGCTTGGGCGTGGAACAACGGCCACTGGTATCACCATTCATGATGAAATTACAATTTTACACCTTAACCACACAATCACCACTGTTCGCGTCACAGTCTCACAATCGCTTTCGTTTAAAGCCATTCTATTTATTTCTCTTCTCTTCTCTACTGTATCTCTCTCTGCTTTGTTGCTTCTTGTTATGACAGTTTGTAACACATTGAGTCTGACAGAGTCTGAAATGGAAAACGGGGATCAGTTCCAGGAGATTTCTCAGGCGAAATACTATTGTCTTTTATTTGATCTTGATGATACCCTCTATCCCTTGAGTTCTGGATTGGCTGAACAAGTGACGAAGAACATCCAGGAGTACATGATTCAAAAGCTTGGGATAATAGAGGATAAAGTTCCTGAGTTGTGCTTTTCCTTATATAAGACTTATGGTACAACCATGGCTGGTCTCAAGGCTATTGGCTATGACTTTGACTATGATGACTTTCATGGCTTTGTTCATGGGAGACTTCCATATGATATGCTGAAACCTGATCCTGTTCTGAGGGGAATTTTGCTAAGCTTGCCTGTTAGGAAAATTATTTTTACAAACTCAGACAAGACCCATGCTAGTAGAGTGCTTCACAGGCTTGGATTGGAGGATTGCTTTGAAAGAGTTATAAGCTTTGAGACCCTCAATTCCTCCAATGAAGATGGCAGTGAATATAAACCAAGTTCCACAGGAATATTTGATTTTTATGAGTACATTCACAGGCCTGATTCTGATGTAGTGCTTCCTAGGACCCCGGTTGTATGCAAACCCTTTCAAGATGCATTTGAAAAGGTTTTCAATATGGCAGATATAGACCCTCAAAGAACATTATTCTTTGATGACAGTCTCCGCAATTTACAAACGGGCAACTCCTTGGGCCTCCACACGGTCTTGGTGGGCACTTCTGTTAGAACTACTGGAGTGGATCATGCCCTAGAGAGTATCCATAATATGAAGGAGGCTTTTCCAGAACTGTGGGAAGGCCATGAAAAGCCTGAAAGTGTGGAGTGCTCTAGAAAGGTTTCAATTGAGACATCAGTAGTAGCTTAA 1497 0.4429 MVLLAMSAGENMRNGESHMQTCELHKGWSASSRFPLHFGNIHRELAYTYTDCVLHLFLLKLEDIAVKVTLRSNKQWRRKQWWKKRGLVKSRRSWRHKREELVEIRRVEVAILGRLSFPPKGKRLLLRGRRGCQRRGYAALPPLGRGTTATGITIHDEITILHLNHTITTVRVTVSQSLSFKAILFISLLFSTVSLSALLLLVMTVCNTLSLTESEMENGDQFQEISQAKYYCLLFDLDDTLYPLSSGLAEQVTKNIQEYMIQKLGIIEDKVPELCFSLYKTYGTTMAGLKAIGYDFDYDDFHGFVHGRLPYDMLKPDPVLRGILLSLPVRKIIFTNSDKTHASRVLHRLGLEDCFERVISFETLNSSNEDGSEYKPSSTGIFDFYEYIHRPDSDVVLPRTPVVCKPFQDAFEKVFNMADIDPQRTLFFDDSLRNLQTGNSLGLHTVLVGTSVRTTGVDHALESIHNMKEAFPELWEGHEKPESVECSRKVSIETSVVA 498
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Spst5g00409 498 PANTHER HALOACID DEHALOGENASE-LIKE HYDROLASE 221 496 - -
Spst5g00409 498 NCBIfam pyrimidine 5'-nucleotidase 232 448 IPR010237 -
Spst5g00409 498 SFLD C1.5.3: 5'-Nucleotidase Like 226 478 IPR010237 -
Spst5g00409 498 CDD HAD_5NT 232 450 IPR010237 -
Spst5g00409 498 NCBIfam HAD-IA family hydrolase 398 448 IPR006439 -
Spst5g00409 498 Gene3D - 296 475 IPR023214 -
Spst5g00409 498 SUPERFAMILY HAD-like 233 452 IPR036412 -
Spst5g00409 498 SFLD Haloacid Dehalogenase 226 478 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Spst5g00409 Spst-Chr5 3274009 3283296 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Spst5g00409 K07025 - gmx:100790444 525.013
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Spst5g00409 5 3274009 3283296 Spst2g02318 2 22539806 22545519 PCT