Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Spst5g00347 ATGGGTCATCCGGACTGTGAAACACAAATTGGAGCACACAGAGTCTTCTCTATGGTGCTTATGCCATCTATGTTTTCTCCTTGGTTAGACAACAAAACAAAAATTGCTCATAAGGCACAGAATGACAGCTTCTTCACTCAGCATGAAACTTTTTCTGGAGATGTAAACTTGAATGGGAAACTGGAAGAAGGAAAGACAATATCTAGTGTTAGTGGGAAGAAATATGCAATTCATCCATATGATGGCTATAGTTTTTCTCCCAGGCTAACTGATGGAAAAAATGATCAAAGTTCTCTTAGGCTAAGCAGTCATCAAATTAGTCTTCTGCTTTCTTCAATCTGGGTCCAGGCAACATCTGTGGGAAATGGCCCTGCAAATTATGAGGCCATGGCACACACCTATAACATTGCTTTATTATTTACTCATTCTAAGGCTTCGAGTCACATGGGTTTAGTAAGATGTTTTCAACTAGCATTCTCCCTCAGGAGGATCTCTTTGGACCAAGGAGGTTTACAACCATCTCGTAGGAGGTCCCTTTTTACATTGGGTTCATACATGCTTATCTACTCTGCCAGGGCTGGCAATGTCCCTGATCTAATTCCAATTGTTAAAGCTTCACTGACAGAGGCAACAGTAGATCCTTTTCTTGAAGTGGTTGATGATATCCGACTGCAGGCTGTCTGTAGAGATTCAGAAAAGATAATTTATGGATCTCAGGAAGATGAGGTTTCTGCTGTGAAGTCTCTTTCAACTGTAGAATTGGACGACAAACAGTTGAAAGAAACTGTAATATCGTATATTATGACTAAATTTTCAGAATTGCCTGAGCGTGAGTTGTTGGCTCGATTTGTGGCACATGTACTGTTGTATAAATATGCGGAGTTAACTAGAATTGTTTCCCTTACTTACCAGGACGAGTTGTCTACCATAAAGAATCAACTTCTACAGGGTTTTTCCCCCGATGATGCATATTCATTAGGACATCCGTTATTTATGGACAGATCAAGACCATGTTCTCCTCTTCAACTGATTGAACTCCCAAGTTTTGATGAGATAATGATTCCGGGTGATTTGATGGAGGAAGAGACTGGACCTGAGCATAGTGGAAGTCAGTCAGATTGCAAAACATCACTGTCAACCAACTACCAAGATGTTCTAAATGTTAATCAACTATTGGATTCGGTTTCGGAAACTGCAAGGCAAGTTGCAAGTTTCTCCACTTCCTCAACTCCTCTACCTTATGACCAAATGAAGGATCAGTGCGAGGCACTTGTAGCAGGGAAACAACAGAAGATGTCAGTCATTCAAAGTTTCAAGCATCAACAAGAGAGTAACGCCATGATTCTTTCAAGTGAAAATGAAGTAATAGTTTCCTCTCTACATGCTAAGGCACTGGAATATTCAACGAGTGATTTGAAGTTGGTGACTCAGCAGTCATTTCAAACATCGGATCAAGCATGCAATTATTCTCATGACTATGGACTGCAAAATTCTTTGAGACTACCTCCTTTGAGCCCCTATGATAAATTCTTGAAAGCTGCGGGATGCTAA 1551 0.4043 MGHPDCETQIGAHRVFSMVLMPSMFSPWLDNKTKIAHKAQNDSFFTQHETFSGDVNLNGKLEEGKTISSVSGKKYAIHPYDGYSFSPRLTDGKNDQSSLRLSSHQISLLLSSIWVQATSVGNGPANYEAMAHTYNIALLFTHSKASSHMGLVRCFQLAFSLRRISLDQGGLQPSRRRSLFTLGSYMLIYSARAGNVPDLIPIVKASLTEATVDPFLEVVDDIRLQAVCRDSEKIIYGSQEDEVSAVKSLSTVELDDKQLKETVISYIMTKFSELPERELLARFVAHVLLYKYAELTRIVSLTYQDELSTIKNQLLQGFSPDDAYSLGHPLFMDRSRPCSPLQLIELPSFDEIMIPGDLMEEETGPEHSGSQSDCKTSLSTNYQDVLNVNQLLDSVSETARQVASFSTSSTPLPYDQMKDQCEALVAGKQQKMSVIQSFKHQQESNAMILSSENEVIVSSLHAKALEYSTSDLKLVTQQSFQTSDQACNYSHDYGLQNSLRLPPLSPYDKFLKAAGC 516
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Spst5g00347 516 PANTHER PUTATIVE, EXPRESSED-RELATED 1 516 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Spst5g00347 Spst-Chr5 2893988 2898468 Transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Spst5g00347 K21842 - gmx:100811354 756.133
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Spst5g00347 5 2893988 2898468 Spst5g00347 5 2893988 2898468 ECH
Spst5g00347 5 2893988 2898468 Spst2g02414 2 23799946 23810061 PCT