Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Spst5g00330 ATGGCAAATCTGGTTCCGGGTGTGCTTCTGAAGCTTCTGCAGCACATGAACACGGATGTGAAGGTTGGTGGTGAGCACAGGTCTTCGCTGTTGCAGGTTGTGAGCATTGTTCCGGCACTTGCAGGGGGTGAACTTTTCCCAAATCAAGGTTTTTACCTCAAAGTCTCTGATTCATCTCATGCCACTTATGTTTCTCTCCCTGATGAGCATGATGATCTCATTCTCAGTGATAAGATTCAGTTGGGTCAGTTTGTGTTTGTTGATCGTTTGGAGGGTGCTTCTCCTGTCCCCATTCTGAAAGGGGTTAGGCCTGTTCCTGGGAGACACCCTTGTGTTGGAACCCCTGAGGATATTGTTGCAACTCATTCCCTTGCTTTCCTTGACAATAATAAGGTCAAGAATGGGATTTCTTCTGGCGGTGCTGACATGGATAGATCGAAGTCTCCGAGGAAAGTGTATAGTGTTGGGGTTGGAGAGAAGGAGAAGAAAGAGAGGGTGAGATCAAATGTTGGTTGTGGGAGTGGTAAGGAGGAAGTACAATCCAGCAAGAGTGGTGCTCTTTTGGGTAGGGGCAAATCTCAGTCTCAGTCCCAGCCTCAGCTATTCAAGCCTTCACTCAAGATTGAGGTGAAGAAGGAGTCCTTGACTAGATTGAGGCCTACCAATAGCCGCTCCATTCCTTCGTCCCCAAGTAGTTGCTACTCGTTGCCGACCTCGTTTGAGAAATTTGCCAATGGGGTCAGGCAACACCAGGCTAAGGTTGGGACTAAAGTGGGAGTGGTGGAGACGGGAAAGGTGGTTCGTGGGGTTAGTAGTCCCGCTGGGAAGAAAATTGTGAATCCGATCAGAGATTTGGTGCAGGGAATTGAGCTGGGGACCAAGGCTCTGCGTAAGAGCTGGGAAGGGAGTATGGAGGTCAAGACTAGAGAGTCTTCTAAAGCCAGGGTTGCAACCAAGTTTGATCCTAAGCTTGAACCCAGTACTCCTAGGAGAAGATCAAACATTTCAGGCGAAAAAATACCACCATCTAAAGAGGAGGGGAAGATCCAAGCACCAACAAAGCCCTCTAAGGAACAACACAAGACTCAAACGTCCACAAAGAAGGCTAATGTTAATGGAACTTCAGCAGAACCAGAAAAGTCGAGCAAACTAAGAACTTCCATTGGGAAGAAAGCAGTAGAAGTTTCTAACTGCGGACTCCCTGGAAATTTGGTCAAAATTTCACTAAGTAATAGAAAAGTGACAGATGCAACTGTTCAATGGGCTTCACTCCCATCATCTATTTCAAAGCTTGGAAGGGAAGTAATGAAGCAGAGAGATGCAGCACAGATAGCAGCAACTGAGGCTATGCAAGAGGCTGCTGCTGCAGAGAGTTTACTGCAGTGCCTAAGAACATATTCCGAGCTAACTAATTCTGCTAAGGAACATAACCCACAGCCAGCAGTAGATCAGTTTTTAACTCTTCATGCTAGCTTGAATAGTACACGGACAATTGCCGAATCCTTAACAAAACCCATTCCAGATTGTTCATCTCCTGATTATGAAAAGGGTACAGCGGAAGAAGCAGTAAGAGTAAAATCAGATAGACAAAAACAAGCGGCTTCTTGGGTCCAGGCAGCCTTGGCCACCAATCTGTCATCCTTTGCTGTTTTTACTAGAGAATCTCAAACATCCAGGCCTCCAGCATCAAGCAACTCTCAAAATCAAAAGACTGGCGTGGGAAATCAACCCATGTTAGTTCTACACAACTCCAGTGAAGATGCTTCATCAAAAGTTCATGCAAAGACTCGTCAGACAGCTAATTCCAAACATGCCTCACAAGGAACTCTTCGCAAACCAGGTGATGGTTTATTAAATGGGCAGAAGCAGCTAGTCCAACCACCCCCTGAATGGGTTAGAGGAAATGGCCTCAATGAGGTAGTTAATTTGATTGAAATGTTGCAGTTACAATCCCGATACTGGTTTTTGGGATTTGTTGAGAGGTTCTTGGACAGTGATGGGGACGCTAGCTTGTCAGATAATGACCAAATAGCAGGTATGCTCACTCAACTAAAGAGTGTTAATGATTGGTTAGATGAGATAGTTTCGAGCAACGACGAGGGAGAATCATGCCAGATATCATCAGAGGCAATTGACCGGTTGAGGAAGAAGATATATGAATATCTTCTAACACATGTTGAGTCTGCTGCTGCTGCACTCAGTGGTGGATCACAATCATCACCTCAGATCCAAACAACACAGATTAAGGCCAAAAGGTGA 2259 0.4564 MANLVPGVLLKLLQHMNTDVKVGGEHRSSLLQVVSIVPALAGGELFPNQGFYLKVSDSSHATYVSLPDEHDDLILSDKIQLGQFVFVDRLEGASPVPILKGVRPVPGRHPCVGTPEDIVATHSLAFLDNNKVKNGISSGGADMDRSKSPRKVYSVGVGEKEKKERVRSNVGCGSGKEEVQSSKSGALLGRGKSQSQSQPQLFKPSLKIEVKKESLTRLRPTNSRSIPSSPSSCYSLPTSFEKFANGVRQHQAKVGTKVGVVETGKVVRGVSSPAGKKIVNPIRDLVQGIELGTKALRKSWEGSMEVKTRESSKARVATKFDPKLEPSTPRRRSNISGEKIPPSKEEGKIQAPTKPSKEQHKTQTSTKKANVNGTSAEPEKSSKLRTSIGKKAVEVSNCGLPGNLVKISLSNRKVTDATVQWASLPSSISKLGREVMKQRDAAQIAATEAMQEAAAAESLLQCLRTYSELTNSAKEHNPQPAVDQFLTLHASLNSTRTIAESLTKPIPDCSSPDYEKGTAEEAVRVKSDRQKQAASWVQAALATNLSSFAVFTRESQTSRPPASSNSQNQKTGVGNQPMLVLHNSSEDASSKVHAKTRQTANSKHASQGTLRKPGDGLLNGQKQLVQPPPEWVRGNGLNEVVNLIEMLQLQSRYWFLGFVERFLDSDGDASLSDNDQIAGMLTQLKSVNDWLDEIVSSNDEGESCQISSEAIDRLRKKIYEYLLTHVESAAAALSGGSQSSPQIQTTQIKAKR 752
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Spst5g00330 752 PANTHER EXPRESSED PROTEIN 1 734 IPR010341 -
Spst5g00330 752 MobiDBLite consensus disorder prediction 552 630 - -
Spst5g00330 752 MobiDBLite consensus disorder prediction 503 526 - -
Spst5g00330 752 MobiDBLite consensus disorder prediction 365 382 - -
Spst5g00330 752 MobiDBLite consensus disorder prediction 337 364 - -
Spst5g00330 752 MobiDBLite consensus disorder prediction 299 386 - -
Spst5g00330 752 MobiDBLite consensus disorder prediction 174 203 - -
Spst5g00330 752 MobiDBLite consensus disorder prediction 300 328 - -
Spst5g00330 752 MobiDBLite consensus disorder prediction 552 587 - -
Spst5g00330 752 MobiDBLite consensus disorder prediction 594 608 - -
Spst5g00330 752 Pfam Plant protein of unknown function (DUF936) 4 733 IPR010341 -
Spst5g00330 752 MobiDBLite consensus disorder prediction 144 171 - -
Spst5g00330 752 MobiDBLite consensus disorder prediction 137 204 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Spst5g00330 Spst-Chr5 2759288 2763509 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Spst5g00330 - - gmx:100814047 1192.18
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Spst5g00330 5 2759288 2763509 Spst5g00330 5 2759288 2763509 ECH
Spst5g00330 5 2759288 2763509 Spst2g02438 2 24017109 24021301 PCT