Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Spst5g00324 ATGCCAAAAAATCTCAGTGTTTCTGTTGAGGATTTTGGGTATCCTCTGGAGCCAGTGAAACTTCTGGCAGGGTCTTGGAGAGAATTTCCAGCACCTTTCATATCTCAGATTATAGAGTTAAAGATGGTCAAAGCTAACAGCACCAACGGCCTATTATCTATTATAGTTATTGCAGTCTTGATTTTCCCGGAAGTTGCATCACAAGCCCTCTCACCCAGTGATTCTGCTGCAGATAATGTGTCAGATGCCATTAGACAATCCGATAATACTATTAGAGTGGATCCTTTAGATAATTTCGAAAAATACAGAGGAGGGTTTAACATCACCAACAAGCATTATTGGAGTTCGGTGATATTCACTGGAGTATATGGATATGCAATTGGGTTGCTCTGCCTTTTGTGTGGAATTGTATATGGAAGCTTTTTGGTAATAACCTTGGCTTGTCAAAAAAATGACGGAAGAAGAAGGATTAAGAATGTCTCTCCTTGTAATTACAAGAGTTGTGATCTTTCACTAATTCCTTTGGCTATATTGCTCACCATTTTTGCTATAGCTGCAACTGGGGTAGCTCTTGCTGGGAGTGCAAGGTTCCATTCTGAAGCGAAAACTGCAGTCAATATTATAATCAAGACAGCGAATGAGGCATCAGAAACGATACAGAACACAACAGGAGCATTAAAGGACATGGAAAGTAGCTTCATGGAAGCCAATGTCAGTCATCAGACTACTGTAAATCTTGACTCTACTACTGAGAGGCTTGATGATGCATCTGCAAACATTGAAAAGCAAGCCAGGAAGAATAGGCGCCTTATTAACAAGGGCTTGAAAGTAGTATTTGTAACTACCACAGTGATCATAAGCATGAACTTGGTTGCTCTAATAGCTTTGGCAGTTTCTGGAGTACTGAGGTTTCGGCGGGCACTATACCTGCTTGTCATATTATGCTGGTTGATGACAGTGATATGCTGGTTATTCTTTGGAGTCTATTTCTTCTTAGAAAAATTTTCTGGTGATGCATGCACAGCTCTTGGCAACTTTCAAGAAAATCCCTATAACAACAGCCTAAGCTCAATCCTCCCTTGTGATGAATTGCTCTCGGCAAAATCAGTTCTATCTGATGTTGGTGCGGGGATCTACGACCTTGTTAATAAGGTGAATGCAAACATTTCAGCCATGCAGGCAACATCAGATGTGAATCTTGTTCATGTTTGCAACCCCTTCTCAGCTCCACCCAAATACTTATACCAGCCAGAGAACTGCCCTGCTAACACTATAAGAATAGGAGACATCCCAAAGGTATTGAAGCCTTTAACATGTTCGAATGACATTGATGGAAACTGTGACAACCTGTATTACATAACTGGCAGTGAATACACGAGAGTTGAGGCTTACACAAATTCAATTCAGAGTCTACTGAATGTGTATCCAACCCTTGAAGAAATATGCTCAAATGGTATGGCTAGGAATGCTGTTTCTTGCAGTGATCATGGTGTTGTTAGTTGTGATCTGGACTATAAAAACTCGTCATGA 1530 0.4065 MPKNLSVSVEDFGYPLEPVKLLAGSWREFPAPFISQIIELKMVKANSTNGLLSIIVIAVLIFPEVASQALSPSDSAADNVSDAIRQSDNTIRVDPLDNFEKYRGGFNITNKHYWSSVIFTGVYGYAIGLLCLLCGIVYGSFLVITLACQKNDGRRRIKNVSPCNYKSCDLSLIPLAILLTIFAIAATGVALAGSARFHSEAKTAVNIIIKTANEASETIQNTTGALKDMESSFMEANVSHQTTVNLDSTTERLDDASANIEKQARKNRRLINKGLKVVFVTTTVIISMNLVALIALAVSGVLRFRRALYLLVILCWLMTVICWLFFGVYFFLEKFSGDACTALGNFQENPYNNSLSSILPCDELLSAKSVLSDVGAGIYDLVNKVNANISAMQATSDVNLVHVCNPFSAPPKYLYQPENCPANTIRIGDIPKVLKPLTCSNDIDGNCDNLYYITGSEYTRVEAYTNSIQSLLNVYPTLEEICSNGMARNAVSCSDHGVVSCDLDYKNSS 509
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Spst5g00324 509 PANTHER TRANSMEMBRANE PROTEIN DDB_G0292058 65 483 IPR040283 -
Spst5g00324 509 Coils Coil 246 273 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Spst5g00324 Spst-Chr5 2731985 2736311 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Spst5g00324 - - gmx:100805495 723.005
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Spst5g00324 5 2731985 2736311 Spst2g02440 2 24033418 24040461 PCT