Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Spst5g00303 ATGGAAGCAGAAGAAGAAGAAGAAGAAGAAGACGCGCCGCAAACCTTCTGGACGGAGAATGGAAGCCACCGCCGGTCGTACTCGCTGTTTCTCAGCTCCGGTGCACTTGTCGTGTGCGTTCTGGTGATTGTACTTGCATTCACGTTGGTCATAATTCCCACGTTGCACTCTCTCCCCAACCATCTTTTCAAACCCAACTCCGTGAAGAAGAGCTGGGACTCCCTTAACTTCGTGCTTATCCTCTTCGCCATTCTCTGCTGCTTCCTCGGCCGGAACAACACCGACGAAAGCTTCTCCGACACGCCACACCAGTACGAGAAACCAAACCCTACAACACCGCAACCGTGGTACGAGGAGTCAGATCGTACGCCATATAAATCGTATAACAGGCTCAGGAGTTTCAACTCCTACCCGGATCTCCGCCAAGAGTCGCCGTGGCTCGCCGCTGATGAAAGATGGCGATTTTATGATGACACACACGTTAACGGTTACCGTGGATTTGACTTGGATGAAGAGAGCGTCAAGAATTTTGAAGTGGTTGATAAAGAGGTTCCGCCGCTACCGGCGTCACGACCACCAGTTCCGGCGGCGGAGAGGAGTCTGGAAAGTAAGAATAAGAGAGCAAGTGCAACTAAAGAGTTGCTGACATCTTCGAAAGAAAAGAAGAAGAAACAAAGAAAAGGAAGCTTTGAAAATCTTAAGCGTATTCGAAATTCTGAACCTCATTCACATCCACGAGTGTCCTCAGTTTTTCATAATCTGTTTCCTTCTAAGAAAAGCAAGAAGAAAAAACTTGAATCTGCTTCATCTTCGCACGTTTCATCATCCAAAACCGAACCGATTCGTGGGAGTGTGACTCCTTCCCTTACATCAAACAAGAGAGAGACTTTCTCGGAGGAAAATGTGATTGTCACTGGTAATGGTACCGAGTCACCTTTGATCCCTACACCTCCGCCGCCGCCGCCGTTCAAGATGCCGGCGTGGAAGTTCCGGGTTCAGGGAGACTTTGTTAGAATAAATAGCATTAGTAGTGGTTCTTCAGATTTAGAAGATGAAGTTGTGGAGTCAGCAAGAAGTGAAGATGGTGGAGAATCTGCAATCTTATTGTTCTATGATCCTAGCCCTGATGTTGACACCAAAGCTGATACTTTCATTGAAAGGTTCAGAGCAGGTTTAAGGATGGAGCAGAAGCAGGGGATTGGTACTTCCAATCTACGCTCTTCACCAGAACCCAAAACTGGACCAAGTTGA 1251 0.4756 MEAEEEEEEEDAPQTFWTENGSHRRSYSLFLSSGALVVCVLVIVLAFTLVIIPTLHSLPNHLFKPNSVKKSWDSLNFVLILFAILCCFLGRNNTDESFSDTPHQYEKPNPTTPQPWYEESDRTPYKSYNRLRSFNSYPDLRQESPWLAADERWRFYDDTHVNGYRGFDLDEESVKNFEVVDKEVPPLPASRPPVPAAERSLESKNKRASATKELLTSSKEKKKKQRKGSFENLKRIRNSEPHSHPRVSSVFHNLFPSKKSKKKKLESASSSHVSSSKTEPIRGSVTPSLTSNKRETFSEENVIVTGNGTESPLIPTPPPPPPFKMPAWKFRVQGDFVRINSISSGSSDLEDEVVESARSEDGGESAILLFYDPSPDVDTKADTFIERFRAGLRMEQKQGIGTSNLRSSPEPKTGPS 416
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Spst5g00303 416 PANTHER COTTON FIBER (DUF761) 16 396 - -
Spst5g00303 416 MobiDBLite consensus disorder prediction 395 416 - -
Spst5g00303 416 MobiDBLite consensus disorder prediction 184 294 - -
Spst5g00303 416 MobiDBLite consensus disorder prediction 98 121 - -
Spst5g00303 416 MobiDBLite consensus disorder prediction 397 416 - -
Spst5g00303 416 MobiDBLite consensus disorder prediction 200 242 - -
Spst5g00303 416 MobiDBLite consensus disorder prediction 98 118 - -
Spst5g00303 416 MobiDBLite consensus disorder prediction 269 294 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Spst5g00303 Spst-Chr5 2610619 2611869 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Spst5g00303 - - vum:124843327 572.007
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Spst5g00303 5 2610619 2611869 Spst4g02207 4 62791346 62793088 PCT