Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Spst5g00293 ATGCTTGCTGCTATGAAAGAGGACATAACATTGGAACTTGGGAGCAACAAAAAAGCAAAGCCTTCAACCCTTTTGTTTGAACTTGTTCTTTCTTACTACTCTCGGGGTATTGTGGTTGGCATGATCATGGAGTTCAGATCCAAGTCATGCAGAGATGAAAGGCTCCAGATTGAAAGCAACGGTGGAGGCAAGGTGGCCCCAACAAGCATGCAAGATCTGAGGTGTCAGAGTGCTAAAAATGCTTCTTCTGGCTGTGCACACCAGATAGGTAGCACTGGTAAGGAGGTGAAGGTGAAGAGAGGGAAAAGGACAGCTGCTAAACCATCAAAAAGTTGGAGCTTCAGTGACCCTGAGTTGCAGAGGAAGAAGAGAGTTGCTGGCTATAAAATATATGCTGCAGAAGGCAAAATGAAAGGCTCTCTAAGAAAGAGTTTTAGAACTTCTTTGAGCACCAGAGAGTTTACGGAGCGCTCCCGGACTAGCATCCATAGTGAGAGGATGAGAGGGCTCACCCTCATTCCCAACAACTGCATCGCGACTTCTGGATACAGCACCTCGCCTTGTAGATCCACTTGGCCGGAACAAATTAGAACTGGACAACTGCATATACCATACACTATTTAA 624 0.4599 MLAAMKEDITLELGSNKKAKPSTLLFELVLSYYSRGIVVGMIMEFRSKSCRDERLQIESNGGGKVAPTSMQDLRCQSAKNASSGCAHQIGSTGKEVKVKRGKRTAAKPSKSWSFSDPELQRKKRVAGYKIYAAEGKMKGSLRKSFRTSLSTREFTERSRTSIHSERMRGLTLIPNNCIATSGYSTSPCRSTWPEQIRTGQLHIPYTI 207
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Spst5g00293 207 PANTHER DOMAIN PROTEIN, PUTATIVE (DUF3511)-RELATED 49 146 - -
Spst5g00293 207 Pfam Domain of unknown function (DUF3511) 114 146 IPR021899 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Spst5g00293 Spst-Chr5 2564916 2568527 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Spst5g00293 - - vra:106761524 172.17
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Spst5g00293 5 2564916 2568527 Spst4g02223 4 62941301 62941660 PCT