Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Spst5g00210 ATGGCACCCAATGGAGAGTGTTTGCCTAGTTCATTCTCTAGGAGCAGCAACAACAACATATGCAAACCTCCAAGGCTGTCATCTGATCATATTCAAAGAACAATCTCAGACATCTCGTTTGAGCTAACCAAGGAGGGGATTGATTTGTCACTTCCACCTATAACTGAGGTTATGGATGCCAAGTGTGAGTGCTGTGGAATGTGCGAGGAGTTTACTCCTGAGTACATAGAGCGTGTGCGTGAAAAGTTCTTGGGGAAGTGGGTGTGTGGTTTGTGTGGTGAGGCAGTGAAGGAAGAGTTGGAGAAGAATGGTGGGAAGAAGGAAGAGGCATTGAGTTCACACATGAGTGCATGTGTGAGGTTCAACAAATATGGGAGGGCTTTCCCGGTTCTGTTCCAAGCTGAGGCCATGAAGGAGATGCTCAAAAAGAACAAAATGGAAGGGAGAAGGACCATGTCCTTCAACCCAAGGGAGAAAGGAGGCCAAAACAAAGGAGGGATTGCAAGGAGTTCAAGCTGCATTCCTGCTATCACAAGAGAGATGAATGGTCTCACAATGGCCAATTAA 567 0.4656 MAPNGECLPSSFSRSSNNNICKPPRLSSDHIQRTISDISFELTKEGIDLSLPPITEVMDAKCECCGMCEEFTPEYIERVREKFLGKWVCGLCGEAVKEELEKNGGKKEEALSSHMSACVRFNKYGRAFPVLFQAEAMKEMLKKNKMEGRRTMSFNPREKGGQNKGGIARSSSCIPAITREMNGLTMAN 188
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Spst5g00210 188 PANTHER OS01G0745000 PROTEIN 55 181 IPR012876 -
Spst5g00210 188 Pfam Protein of unknown function (DUF1677) 57 143 IPR012876 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Spst5g00210 Spst-Chr5 1812846 1813412 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Spst5g00210 - - gmx:100785884 336.65
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Spst5g00210 5 1812846 1813412 Spst5g00210 5 1812846 1813412 ECH
Spst5g00210 5 1812846 1813412 Spst4g02324 4 63965615 63966178 PCT