Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Spst5g00129 ATGGACGTTGTTCTTCAAACCAGAGGCCTTCTCTCTCTTCCTCCCATAAACCCCATAAACAAAGTATCACACCTACACCCCTCCCAGGGTTTAAGGCACAGGCTTTTCTCACCAAAGCCAAAAATCCTTGTTGCCTCTTCTCTTTCATCCAATAGGTTCCAAAAACTATCACCCAAACCCAATGTCTTTGCCCAAAGGGACAAAAATCAAAATTTGTTCCTGTGCAGGGCTGAGGCTGCAGCAGCTGCAGCCTCCTTTGGGGAACCAGAATCTGATAAACCGAAGTTGTTGGGTGTTGAAGTTGCTACCTTGAAGAAGATTGTGCCTCTGGGGATGATGTTCTTTTGCATCCTCTTTAACTACACCATCTTGAGAGACACAAAGGATGTGTTGGTTGTGACAGCCAAAGGAAGCAGTGCTGAGATTATACCGTTTCTCAAAACTTGGGTGAACCTTCCCATGGCCATTGGCTTCATGCTGTTGTACACGAAGTTGGCTAATGTGTTGTCCAAACAAGCTCTCTTTTATTCTATTATCCTTCCCTTCATTGCCTTCTTTGGGGCTTTTGGTTTTGTTCTGTACCCTCTCAGCAATTATATTCACCCGGAGGCATTTGCGGATAAGCTTCTTAACATCCTTGGGCCTCGGTTTCTTGGTCCTCTTGCAATTATGAGGATATGGAGCTTTTGTTTGTTCTATGTCATGGCTGAATTGTGGGGGAGTGTGGTCATTTCTGTGCTGTTTTGGGGGTTTGCCAATCAGATAACAACTGTTGAGGAAGCAAAACGATTCTATCCTTTATTTGGACTTGGGGCCAATGTAGCCCTTGTGTTCTCTGGTCGGACAGTAAAATACTTTTCTAATCTAAGGAAGAATTTAGGTCCTGGAGTTGATGGTTGGGCCATCTCTCTAAAAGGAATGATGAGCATAGTTGTGGGCATGGGACTTGCAATCTGTTTCATATATTGGTGGGTGAATAATTATGTTCCACTTCCTACACGTAGCAAGAAGAAGAAGGAGAAGCCCAAAATGGGAACAATGGAGAGCATAAAGTTCTTGGTGTCTTCAAAATATATAAGGGATCTTGCGACTTTAGTGGTTGCGTATGGAATTAGCATAAATCTTGTTGAAGTTACGTGGAAATCAAAGCTCAAAGCTCAGTTTCCTAGCCCCAACGAGTACTCATCGTTTATGGGAGACTTTTCAACTGCAACTGGAATTGCTACATTCACAATGATGCTTCTCAGCCAATTTATATTTGACAAATATGGATGGGGAGTTGCTGCCAAGATCACCCCCACTGTCCTGCTCTTGACAGGAATTGGTTTCTTCTCTCTCATATTATTTGGCGGCCCAGTTGCTCCCGTTATTGCAAAGTTTGGAATGACTCCACTTCTAGCTGCTGTATACGTGGGTGCCATGCAGAACATATTCAGCAAGAGTGCTAAGTACAGTTTATTTGATCCTTGCAAAGAAATGGCCTACATACCCTTGGATGAGGATACCAAGGTGAAGGGGAAGGCAGCCATTGATGTTGTGTGCAACCCATTGGGGAAATCTGGAGGAGCTCTAATTCAGCAGTTCATGATCTTAACTTTTGGTTCACTGGCTAATTCAACTCCATACCTGGGAGGGGTGCTTCTGGTGATTGTTCTTGCCTGGTTAGCAGCGGCCAAGTCGCTTGATTCCCAGTTCACTGCCTTGCGTAGAGAAGAAGAGCTTGAGAAAGAGATGGAAAGAGCAGCTGCTGTTAAGATACCAGTGGTGGCCAAGGATGAGGATGGAAACGGTTCTCTTGCAAGTGTTCCACTGTTGAATCCAACAACTGGTGGTGACTCCTCAAGTACATTGAATTGA 1857 0.4437 MDVVLQTRGLLSLPPINPINKVSHLHPSQGLRHRLFSPKPKILVASSLSSNRFQKLSPKPNVFAQRDKNQNLFLCRAEAAAAAASFGEPESDKPKLLGVEVATLKKIVPLGMMFFCILFNYTILRDTKDVLVVTAKGSSAEIIPFLKTWVNLPMAIGFMLLYTKLANVLSKQALFYSIILPFIAFFGAFGFVLYPLSNYIHPEAFADKLLNILGPRFLGPLAIMRIWSFCLFYVMAELWGSVVISVLFWGFANQITTVEEAKRFYPLFGLGANVALVFSGRTVKYFSNLRKNLGPGVDGWAISLKGMMSIVVGMGLAICFIYWWVNNYVPLPTRSKKKKEKPKMGTMESIKFLVSSKYIRDLATLVVAYGISINLVEVTWKSKLKAQFPSPNEYSSFMGDFSTATGIATFTMMLLSQFIFDKYGWGVAAKITPTVLLLTGIGFFSLILFGGPVAPVIAKFGMTPLLAAVYVGAMQNIFSKSAKYSLFDPCKEMAYIPLDEDTKVKGKAAIDVVCNPLGKSGGALIQQFMILTFGSLANSTPYLGGVLLVIVLAWLAAAKSLDSQFTALRREEELEKEMERAAAVKIPVVAKDEDGNGSLASVPLLNPTTGGDSSSTLN 618
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Spst5g00129 618 Pfam TLC ATP/ADP transporter 95 565 IPR004667 GO:0005471|GO:0006862|GO:0016020
Spst5g00129 618 SUPERFAMILY MFS general substrate transporter 212 474 IPR036259 -
Spst5g00129 618 MobiDBLite consensus disorder prediction 593 618 - -
Spst5g00129 618 NCBIfam NTP/NDP exchange transporter 99 565 IPR004667 GO:0005471|GO:0006862|GO:0016020
Spst5g00129 618 PANTHER - 1 599 IPR004667 GO:0005471|GO:0006862|GO:0016020
Spst5g00129 618 MobiDBLite consensus disorder prediction 601 618 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Spst5g00129 Spst-Chr5 1214052 1217309 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Spst5g00129 1 600 Organic Solute Cotransporters AT1G80300 80.984 0.0 968
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Spst5g00129 K03301 - gmx:100775892 1093.57
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Spst5g00129 5 1214052 1217309 Spst5g00129 5 1214052 1217309 ECH
Spst5g00129 5 1214052 1217309 Spst4g02391 4 64439546 64442669 PCT