Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Spst5g00013 ATGGGTTCGAGATTCCCATCTCATCAGCTCAGCAACGGCTTGTATGTATCAGGTCGGCCTGAACAGCCGAAAGAAAGAACTCCAACAATGAGCTCAGTTGCCATGCCTTACACTGGTGGAGACATCAAGAAATCAGGAGAATTAGGCAAAATGTTTGATATCCCCATGGATGGTTCTAAATCTAGAAAATCTGGTCAGTTAAATAGTGCTCCTTCACGGACTGGATCGTTTGCGGGTGCTGCTTCACATTCTGGACCTATCTTGACAAATACTGCAGCTCGTTCTATTTATACCACATCAGGTAACATATCTTCTGGAGGCATGTCTTCTTCTGTCTCCATGAAAAAGACCAACTCTGGTCCACTGAATAAACACGGGGAGCCTGTGAAAAAGTCATCTGGACCTCAATCTGGCGGAGTTACACGCCAAAACTCTGGTCCGATTCCACCTGTTCTTCCTACGACTGGTCTTATTACATCTGGTCCTCTAAATTCATCTGGGGCTCCAAGGAAAGTATCTGGTCCATTAGAGTTTACAGGATCAATGAAATCACATAGCTCTGTAACTCACAATCCAGCCACGACCACTCTAAGCGTAGATGATGAATATTCCTTCAGGAGGAACTTCCCAAAGCCAATATTGTGGTCTGTGATTCTGATTTTCATTATGGGGTTCATTGCTGGTGCATTTATTCTTGGAGCTGTTCACAATGCCATTCTCCTAGTTGTTGTAATTGTTCTTTTTGGTGCTGTGGCTGCATTATTCACGTGGAATAGTTGCTGTGGGAGGACAGCCATTGTTGGTTTCATTTCTCGTTATCCCGATGCTGAGCTTAGAACTGCCAAGAATGGGCAATTTGTGAAGGTTTCTGGGGTGGTTACCTGTGGTAATGTTCCATTAGAGTCCTCCTTTCAAAAAGTTCCTAGATGTGTCTATACTTCTACTAGCTTGTTTGAATATCGAGGGTGGGATTCAAAAGCAGCCAACCCAAAGCATCGCTGTTTTACATGGGGACTCAGAACAGCTGAGAGGCATGTGGTGGACTTCTACATTTCTGATTTCCAATCTGGACTTAGAGCATTGGTTAAAACAGGCTATGGGGCAAGAGTGACTCCTTATGTCGACGATTCTATTGTAATTGATGTTAGCGCTGACAATAAAGACATGTCCCCAGAGTTCCTTCGATGGTTGCGAGAAAGAAATCTTTCAAGTGATGATCGAATGATGCAATTAAAAGAAGGGTACATCAAAGAAGGTAGCACAGTTAGCGTAATGGGGGTTGTTCAAAGAAATGACAATGTACTTATGATAGTCCCTCCTCCCGAGCCTTTGACTACCGGATGCCAATGGGCTAAATGTATATTTCCAGCTAGCCTTGAGGGTATTATTTTGAGATGTGAGGATACATCAAAGATTGATGTCATTCCAGTGTAG 1434 0.4351 MGSRFPSHQLSNGLYVSGRPEQPKERTPTMSSVAMPYTGGDIKKSGELGKMFDIPMDGSKSRKSGQLNSAPSRTGSFAGAASHSGPILTNTAARSIYTTSGNISSGGMSSSVSMKKTNSGPLNKHGEPVKKSSGPQSGGVTRQNSGPIPPVLPTTGLITSGPLNSSGAPRKVSGPLEFTGSMKSHSSVTHNPATTTLSVDDEYSFRRNFPKPILWSVILIFIMGFIAGAFILGAVHNAILLVVVIVLFGAVAALFTWNSCCGRTAIVGFISRYPDAELRTAKNGQFVKVSGVVTCGNVPLESSFQKVPRCVYTSTSLFEYRGWDSKAANPKHRCFTWGLRTAERHVVDFYISDFQSGLRALVKTGYGARVTPYVDDSIVIDVSADNKDMSPEFLRWLRERNLSSDDRMMQLKEGYIKEGSTVSVMGVVQRNDNVLMIVPPPEPLTTGCQWAKCIFPASLEGIILRCEDTSKIDVIPV 477
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Spst5g00013 477 MobiDBLite consensus disorder prediction 1 85 - -
Spst5g00013 477 MobiDBLite consensus disorder prediction 101 120 - -
Spst5g00013 477 MobiDBLite consensus disorder prediction 134 150 - -
Spst5g00013 477 MobiDBLite consensus disorder prediction 1 16 - -
Spst5g00013 477 MobiDBLite consensus disorder prediction 61 85 - -
Spst5g00013 477 MobiDBLite consensus disorder prediction 101 151 - -
Spst5g00013 477 PANTHER OSJNBA0035M09.9 PROTEIN 1 477 IPR040339 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Spst5g00013 Spst-Chr5 350964 353643 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Spst5g00013 - - gmx:100820076 881.708
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Spst5g00013 5 350964 353643 Spst5g00013 5 350964 353643 ECH
Spst5g00013 5 350964 353643 Spst4g02512 4 65228983 65232151 PCT