Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Spst4g03455 ATGGGAGACAACAAAGACCAGGATTTCTTTTCCCACAAAAACCCGACTACCTCTCAGGTGGTGGAAGAGATGAAGGAGCTATGGAGCATGGCCGTACCCATCACAGCTACGAACATTTTAGTGTTTGTGAGGGCTGTAGTTTCTGTTCTCTTCTTGGGTAGGCTTGGAAGTTTAGAGCTAGCAGGTGGTGCACTTTCCATAGGCTTTACCAACATAACAGGGTACTCTGTTCTTGTGGGTCTTGCAGCAGGTCTAGAACCTGTATGCAGCCAAGCCTATGGTAGCAAAAACTGGGACCTCCTCTCTCTATCTCTTCAGCGCATGGTCTTCATCCTCCTGATGGCAATCATCCCCATCAGTCTTCTCTGGCTGAACCTTGAAAGGATTATGCTGTTCATGGGCCAGGACAGTGCCATCACAGGAATGGCATCACTCTATTGTTTCTACTCTCTCCCTGACCTTTTAACGAACACTTTGCTCCAACCATTAAGGGTTTTTTTAAGGTCTCAAAAGGTGACCACACCTATGATGTATTGTTCCCTTGTAGCAGTGTTGTTTCATGTGCCACTGAACTACTTGTTGGTGGTGGTGATGGGGCTGGGGGTGCCAGGGGTGGCCATGGCTTCTGTGCTGACCAATATGAACATGGTTGTGCTTATGGCAGGGTATGTGTGTGTGTACAGGAAGAGGGAAGTAGTGTTGAAGTGGGGATGCGGAGGGGGAGTGGTGGCTGGGATGTGTTCTGGGTTGGGGAAGTTGATGGGGTTTGCTGTACCTAGTTGCCTTATGATATGTTTAGAGTGGTGGTGGTACGAGATTGTGACTGTGCTGGCTGGGTACTTGCCACGTCCAACACTGGCTGTGGCTGCCACTGGTATTCTGATTCAGACAACCAGCATGATGTACACTGTACCCATGGCACTTGCGGGGTGTGTTTCTGCTAGGGTAGGGAATGAGCTTGGAGCTGGGAAACCATACAAAGCAAAACTAGCTGCAATGGTTGCCCTAGGATGTGCATTTGTGATAGGCTTTATCAATGTGACATGGACTGTGATATTGGGTCAAAGATGGGCTGGGCTTTTCACCAATGATGAGCCAGTCAAAGCCTTGGTTGCCTCAGTGATGCCAATTATGGGCCTGTGTGAGCTTGGGAACTGCCCACAGACAACAGGATGTGGGATCCTGCGGGGCACGGCCCGGCCTGGTGTGGGGGCCCATATAAATCTGGGCTCATTCTACTTTGTGGGCACTCCAGTGGCGGTGGGTCTGGCATTTTGGTTCAAGATTGGGTTCAGTGGGCTTTGGTTTGGGCTTCTGTCGGCCCAGGTGGCATGTGCAGTGTCAATCCTGTATGTTGTGTTGATGAAGACAGATTGGGAAGCTGAGGCACTGAAAGCTGAAAAGCTCACAAGGGTGGAAATGGGGAGTTGCAATGGACTTAGGAGTAAGGAGAATGAGAAAGAGGAGGAAATGAAAGGGTTGTTGATGAATGGTAAGGGGAACAACGAAGATGACATTTGCTAA 1524 0.4961 MGDNKDQDFFSHKNPTTSQVVEEMKELWSMAVPITATNILVFVRAVVSVLFLGRLGSLELAGGALSIGFTNITGYSVLVGLAAGLEPVCSQAYGSKNWDLLSLSLQRMVFILLMAIIPISLLWLNLERIMLFMGQDSAITGMASLYCFYSLPDLLTNTLLQPLRVFLRSQKVTTPMMYCSLVAVLFHVPLNYLLVVVMGLGVPGVAMASVLTNMNMVVLMAGYVCVYRKREVVLKWGCGGGVVAGMCSGLGKLMGFAVPSCLMICLEWWWYEIVTVLAGYLPRPTLAVAATGILIQTTSMMYTVPMALAGCVSARVGNELGAGKPYKAKLAAMVALGCAFVIGFINVTWTVILGQRWAGLFTNDEPVKALVASVMPIMGLCELGNCPQTTGCGILRGTARPGVGAHINLGSFYFVGTPVAVGLAFWFKIGFSGLWFGLLSAQVACAVSILYVVLMKTDWEAEALKAEKLTRVEMGSCNGLRSKENEKEEEMKGLLMNGKGNNEDDIC 507
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Spst4g03455 507 PANTHER MULTIDRUG RESISTANCE PROTEIN 17 459 - -
Spst4g03455 507 Pfam MatE 33 193 IPR002528 GO:0015297|GO:0016020|GO:0042910|GO:0055085
Spst4g03455 507 Pfam MatE 259 420 IPR002528 GO:0015297|GO:0016020|GO:0042910|GO:0055085
Spst4g03455 507 CDD MATE_eukaryotic 23 465 IPR045069 GO:0042910|GO:1990961
Spst4g03455 507 NCBIfam MATE family efflux transporter 33 435 IPR002528 GO:0015297|GO:0016020|GO:0042910|GO:0055085
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Spst4g03455 Spst-Chr4 75080595 75084154 Dispersed/Transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Spst4g03455 K03327 - gmx:100794753 936.021
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Spst4g03455 4 75080595 75084154 Spst4g03455 4 75080595 75084154 ECH