Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Spst4g03406 ATGGCTCCAGCTAGCAAGGCTGATAAAAAGGCTGCAGTGGATGCAGCTGCATGGATGTTCAATGTTGTAACATCTGTTGGAATTATCATTGTAAACAAAGCTTTGATGGGCACTTATGGCTTCAGTTTCGCTACAACATTAACAGGCATGCACTTCGCGACCACAACTTTAATGACAATCATACTAAAGATGCTGGGATATGTCCAGCATTCTCATTTACCCTTGCCGGATCTTCTAAAATTTGTTGTCTTTGCTAACTTCTCTATTGTTGGAATGAATGTTAGTCTAATGTGGAACTCAGTTGGATTCTATCAAATTGCAAAGTTGAGTATGATTCCTGTATCATGCCTGTTGGAAGTTGTTCTCGACAAGATTCGGTATTCAAGAGATACAAAACTGAGCATAGGTGTTGTTCTTTTGGGTGTTGGTGTTTGCACTGTTACTGATGTGAGTGTTAACACAAGAGGATTCGTTGCTGCCTTTATTGCAGTATGGAGCACTTCTATGCAACAATATTATGTTCATTACCTTCAACGGAAGTATTCTCTAAGTTCTTTCAACCTGTTGGGACATACAGCACCTGCACAGGCTGCTTCACTACTGTTATTGGGACCTTTTCTTGATTATTGGTTGACAAACACAAGAGTTGACAGATATGACTACAACACTGCCTCGATGATATTCATATTCCTGTCATGCACCATTGCAGTTGGTACCAACCTAAGCCAATTTATCTGCATTGGAAGATTCACTGCTGTTTCTTTTCAAGTATTGGGACATATGAAGACAATACTTGTTTTAATCATGGGGTTCTTTTTCTTTGGTAAAGAGGGCCTGAATCTCCACGTGGTTTTTGGAATGGTTATAGCTGTTGTTGGAATGATGTGGTATGGCAATGCCTCATCCAAGCCTGGTGGAAAGGAGCGCCGGAGCCATTCTCTTCCTACCAACAAAACAGAAACATGA 966 0.4068 MAPASKADKKAAVDAAAWMFNVVTSVGIIIVNKALMGTYGFSFATTLTGMHFATTTLMTIILKMLGYVQHSHLPLPDLLKFVVFANFSIVGMNVSLMWNSVGFYQIAKLSMIPVSCLLEVVLDKIRYSRDTKLSIGVVLLGVGVCTVTDVSVNTRGFVAAFIAVWSTSMQQYYVHYLQRKYSLSSFNLLGHTAPAQAASLLLLGPFLDYWLTNTRVDRYDYNTASMIFIFLSCTIAVGTNLSQFICIGRFTAVSFQVLGHMKTILVLIMGFFFFGKEGLNLHVVFGMVIAVVGMMWYGNASSKPGGKERRSHSLPTNKTET 321
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Spst4g03406 321 MobiDBLite consensus disorder prediction 301 321 - -
Spst4g03406 321 PANTHER SOLUTE CARRIER FAMILY 35 17 301 - -
Spst4g03406 321 Pfam Triose-phosphate Transporter family 23 297 IPR004853 -
Spst4g03406 321 MobiDBLite consensus disorder prediction 305 321 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Spst4g03406 Spst-Chr4 74401597 74404107 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Spst4g03406 18 320 Organic Solute Cotransporters AT1G21870 26.250 1.50e-13 68.6
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Spst4g03406 K26224 - gmx:100786437 588.956
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Spst4g03406 4 74401597 74404107 Spst4g03406 4 74401597 74404107 ECH
Spst4g03406 4 74401597 74404107 Spst10g00817 10 8644318 8646221 PCT