Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Spst4g03404 ATGATCGCCGTCCTCCAGCTGGCTTCCAGAAAGAAACGCCTCTCCAGCAGGTGCGCTTCCTTTGTTTGCTTTGGTTGCGCCTCTGCAAGGCTTGATACTAAATCTCATCTTAGAGTGGGCCATGCCAAACATCATGATGTCTCTTCAGGGACCCTGGTTTCCACCAAGGGCATGCATCCTTCTGATAATGGAAATGGTGATAGTAGAAAGGTTGCACTTAAAAGTAGCTTAAAAAGGCGAGAAAATAAACAACCAGCTCCTGTTGAGGCTGTTTCCGAACATGAGGCATCGGTAGGAAAAGGGAATAATGCTCATGGTCAAACAGGGAGAAGGGAAGTTCAATGGACAGATGCTTGTGGTAGTGAGCTTGTTCAAATACAAGAATTTGAACCCAGTTTGGAAGTTCCTGAAAGTCTTGGGGCTTTGATTGAAAACGGTTTGCATTTTCATGAGATCCCTTTCCTCACCATGTTCTCTCTATTCACTGGCTTCAACATTTTGAAGGATTTCTCCATTGAAAATTGCGAAGTGTCAGTTGATGAATTTGACAATGGGAATAACAAAACTTGCTCCTGTGCTATAATGTAA 588 0.4354 MIAVLQLASRKKRLSSRCASFVCFGCASARLDTKSHLRVGHAKHHDVSSGTLVSTKGMHPSDNGNGDSRKVALKSSLKRRENKQPAPVEAVSEHEASVGKGNNAHGQTGRREVQWTDACGSELVQIQEFEPSLEVPESLGALIENGLHFHEIPFLTMFSLFTGFNILKDFSIENCEVSVDEFDNGNNKTCSCAIM 195
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Spst4g03404 195 MobiDBLite consensus disorder prediction 72 88 - -
Spst4g03404 195 MobiDBLite consensus disorder prediction 48 62 - -
Spst4g03404 195 MobiDBLite consensus disorder prediction 44 111 - -
Spst4g03404 195 PANTHER LIGHT-HARVESTING COMPLEX-LIKE PROTEIN OHP2, CHLOROPLASTIC 13 195 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Spst4g03404 Spst-Chr4 74345001 74348764 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Spst4g03404 - - pvu:PHAVU_004G091200g 202.601
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Spst4g03404 4 74345001 74348764 Spst4g03404 4 74345001 74348764 ECH
Spst4g03404 4 74345001 74348764 Spst10g00819 10 8663977 8669904 PCT