Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Spst4g03357 ATGTGCAGATTACAGAGATTATACCTGGAAAATAACAGGTTAAATGGCACATTTCCGAGCTTCATTCAAAATTCTTCATGGTGCAACAGACACATATTACGGACATTGCGATTATCTTACAACCAAATTACTGGCAAGATACCCGAGGGCTTTAGCCTGCTATCTGAATTGGAGCATTTATCCTTGCAGGAAAATTCTTTTGAGGGCGAAGTCACTGAATCTCATCTTTCTAATTTTTCTAAATTAGAATACTTATTCTTGTCACACAATTCGTTGTCTCTAAAATTTGGGTCCAGTTGGATGCCACCTTTTCGATTAAGATCCTTGGGTCTTGCATCTTGCAAGCTAGGTCCGAATTTTCCTAGTTGGCTCCAGACTCAAAGCTCCTTAATCTATCTGGATATATCTGATAATGGGCTTAATGATTCTGCACCTGCATGGTTTTGGAACAAGTTGCAAAATATGTACGAGTTGAATATGTCTCACAATAATCTCATTGGTTCAATTCCTGATCCGCAATTCATGCTTTCTTCCAGACCATCTATAAATTTAAGTTCAAATAAATTTGAGGGAAAAGTTCCATCATTTTTGCTACAAGCTTCAGAGTTGTTACTCTCTGCAAATAAGTTTTCCGATTTTTATTCATTCTTATGTGGAAACATCACAGCTACAAACTTGGCTACTTTAGATTTATCATATAATCAAATAAAGGGACAACTTCCAGATTGTTGGAAATCTGTAGACCAGTTATTGTTTCTTGATTTAAGCAACAATAAACTGTCAGGGAAGATTCCTATCTCCATGGGCACTCTTGTTAATTTGGAAGCTTTGGTTTTACAAAACAATAGTTTAATGGGTGAATTGCCATCCTCTTTGAAGAATTGCAACAATTTAATTATGCTGGATGTGAGTGAGAATATGTTGTCCGGTCCAATACCATCATGGGTTGGAGAAAGCCTGCAGCAATTGATAATCTTGATCATGCGAGGGAATCAGTTTTCTGGAAGTATTCCCCTTCGTCTATGTTATTTAAAGCGTATTCAATTATTAGATCTTTCAAGGAATAAGTTATCAGAAGAAATTCCATCTTGCTTCAAGAATTTTACTGTATTGTCTGAAAAGAGCATCGATAGAATTGAAACTGAAAGTCGTGTGCATTGGTACAATAGTACTTACTTTGCAACTTACACTGTTTTCAGTTATAGTTATTATACGCTTCACATAATATGCATGTGGAAAGGTGTGGAACGCAGCTTCAGATCCAAAATGATTCTTCAGAGCATTGATCTCTCAAGTAACAATTTAACAGGTGAAATGCCAAAAGAGATTGCATATATGCTCGGGTTAGTTTCTTTGAATTTATCAAGGAACAGTTTGAGTGGAGAAATTCCTTTCGAGATTGGAAATTTAAGAAAATTAGACTTGTCACATAACTCACTTTCTGGAAGAATCCCATTGGGAAGACACTTGGATACATTTGATGCTTCTTGTTATGAAGGAAATATTGATCTTTGTGGTAAACCTCTTGAAAAAAGGTGCCCTGGAGATGAGAGAGTGACAAAGTGTGAAGGAGGAGAAGTGCATGATGAAGGTGATGATTCAGCATTGTATGGAGCATTATACATGAGCTTAGGGCTGGGATTTTTGACAGGCTTCTGGGGCTTATTAGGGCCATTACTAGTTTGGGAAGCATGGAGAATTGCTTACATGAGGTTCTTGACCAGACTGACAGACTATATTCTTGTAATGGTTGAAGTGAAGATAGCAAAGTGCCAAAGGTGGTTCAAAGACTAG 1794 0.3707 MCRLQRLYLENNRLNGTFPSFIQNSSWCNRHILRTLRLSYNQITGKIPEGFSLLSELEHLSLQENSFEGEVTESHLSNFSKLEYLFLSHNSLSLKFGSSWMPPFRLRSLGLASCKLGPNFPSWLQTQSSLIYLDISDNGLNDSAPAWFWNKLQNMYELNMSHNNLIGSIPDPQFMLSSRPSINLSSNKFEGKVPSFLLQASELLLSANKFSDFYSFLCGNITATNLATLDLSYNQIKGQLPDCWKSVDQLLFLDLSNNKLSGKIPISMGTLVNLEALVLQNNSLMGELPSSLKNCNNLIMLDVSENMLSGPIPSWVGESLQQLIILIMRGNQFSGSIPLRLCYLKRIQLLDLSRNKLSEEIPSCFKNFTVLSEKSIDRIETESRVHWYNSTYFATYTVFSYSYYTLHIICMWKGVERSFRSKMILQSIDLSSNNLTGEMPKEIAYMLGLVSLNLSRNSLSGEIPFEIGNLRKLDLSHNSLSGRIPLGRHLDTFDASCYEGNIDLCGKPLEKRCPGDERVTKCEGGEVHDEGDDSALYGALYMSLGLGFLTGFWGLLGPLLVWEAWRIAYMRFLTRLTDYILVMVEVKIAKCQRWFKD 597
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Spst4g03357 597 Pfam Leucine rich repeat 3 66 IPR001611 GO:0005515
Spst4g03357 597 Pfam Leucine rich repeat 224 284 IPR001611 GO:0005515
Spst4g03357 597 Pfam Leucine Rich Repeat 469 485 IPR001611 GO:0005515
Spst4g03357 597 Pfam Leucine Rich Repeat 347 368 IPR001611 GO:0005515
Spst4g03357 597 FunFam Leucine-rich repeat receptor-like protein kinase 424 515 - -
Spst4g03357 597 ProSiteProfiles Leucine-rich repeat profile. 469 491 IPR001611 GO:0005515
Spst4g03357 597 SUPERFAMILY L domain-like 192 508 - -
Spst4g03357 597 Gene3D Ribonuclease Inhibitor 181 521 IPR032675 -
Spst4g03357 597 PANTHER LRR RECEPTOR-LIKE KINASE 1 576 - -
Spst4g03357 597 FunFam Tyrosine-sulfated glycopeptide receptor 1 1 316 - -
Spst4g03357 597 PRINTS Leucine-rich repeat signature 467 480 - -
Spst4g03357 597 PRINTS Leucine-rich repeat signature 250 263 - -
Spst4g03357 597 Gene3D Ribonuclease Inhibitor 1 179 IPR032675 -
Spst4g03357 597 SUPERFAMILY L domain-like 3 215 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Spst4g03357 Spst-Chr4 73563347 73565221 Dispersed/Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Spst4g03357 4 565 Miscellaneous Gene Families AT1G74190 29.395 1.39e-63 224
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Spst4g03357 - - vun:114180773 875.159
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Spst4g03357 4 73563347 73565221 Spst4g03357 4 73563347 73565221 ECH