Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Spst4g03353 ATGAGTGCTTATTTTCTCAGAACATTTTATGTTCTTCTCCTGCTTTTGTTGCATACCTCAGGAATCGTTGCGGCATTCAACAGCTCAAGTGAAAGTATGGAAGCAAAGTGCAAAGAGAGGGAGAGGCAAGCACTCCTCAGCTTCAAACAAAGCCTCGTAGATGACTCTGCCATGCTGTCTACTTGGACTGACGTTCACAGAGATTGCTGCAAATGGAAAGGCATTCAGTGCGACAATCAAACTGGTCATGTACGTGTACTTGACCTTCATGGCAACCATGACTTTGAACTGTATTTTGGTGGTGATATCAATTTCACTTCATTGATTCACTTGCAATATATTCAACATCTGGATCTCAGCAATAATCAGTTTTTAAGTTACATACCAGAGTTTATAGTCTCCTTCACCAACTTAAGATTTCTCAATCTCTCCAACTCCGATATTTTGGGGAGGATTCCTTCTGAACTTGGAAATCTTTTACAACTACGCTATCTGGATCTTGGGGATAATTATCTTTGGGGAGAAATTCCTGTTCAGATTGGGAATCTCATACACTTACAGTATCTCGATCTTGGAGGATTTTATCTTTCCGGAAAAATCCCATGTCAAATTGGGAATCTCAGAAAGCTACAATATCTCAGTCTTGGAAGTAACACTTTTCTAAATATAAATAGTATGGGAGATTATGTTTCAAACACCCTTTCTGGAGGAATCCCTTTTCACATCGGGAATCTTCCATTCTTGCATACTCTTCGATTAGGTGGCAATTTTGATATAAAAGCTGAGGATGCACAGTGGCTGTCTACACTCCATTCCTTGACAATTCTTGAGCTGAGTTCAGTGCATAAGCTTGGCTCCTCTCACCAGTGGCTACAAACCATTAGTAAGCTCATTCCAAACTTGAAAGAGTTGAGGCTAATTGATTGTAATCTTTTCGATAATGATATTCAATCTTTGTTTCATTCTCCTTCTTCTAACTTTTCCACTTCTCTTACCATCCTAGATCTCTCTTCTAATATGTTGACATCATCATCAACACTTCAACTCCTGTTTAACTTTAGCCTTCATCTTCAAGAGCTTCATCTTTCTTATAATAATTTTGCTTTCTCACCTTCTCTACGTCCAGATTTTCCATCTCTTAAGATCCTCGACCTCTCTTATAGTAGTCTAACATCATCGATGTTTCTAGCTAATTTCAGTGTCAGCTCCAAACTACAAAAGCTTCATCTAAGAAACTGCAGTCTTATAGATAGAAATTTCCTTGTTTCATCTAGTTCTACGATGAATTCTTTGTCTTCTCTTCAATACCTTAATCTCTCCAACAACTTGCTAAAATCATGCTCTATATTTCACTGGCTTTCTAACTTTACTACCAATCTGCATACCCTTCTACTTCCTTTTAATTTCTTAGAAGGTCCCATTCCAGATGATTTTGGAAAAGCGATGAACTCTCTTGAATTTGTTTACCTCTTCAATAACAAACTTCAAGGCAAGGTTCCGTATTTCTTTGGGAGCATGTGCAGATTACAGACCATAGACCTAGAAAATAACAGGTTGAATGGCGAATTTTCGAGCTTCATTCAAAACTCTTCATGGTGCAACATACACATGTTACGGATATTAAGATTATCTCACAACCAAATTACTGGCAAGATACCCCAGAGCATCAGCCTGCTATCAGAGTTGGAGCATTTATCCTTGGAGGGAAATTCTTTAGAGGGTGATGTCACTGAATCTCATCTGTCTAATTTTTCTAAATTAGAAGTCTTATTCTTGTCACACAACTCGTTATCTCTAAAATTTGGGTCTAGTTGGATGCCACCTTTTCGATTATGGTCCTTGGGTCTTGCATCTTGCAAGCTAGGTCCCAACTTTCCTAGTTGGCTGCAGACTCAAAGCTCCTTAATCCAGCTGGATATATCTGATAATGGGCTTAATGATTCCGCACCGGAATGGTTTTGGAACAAGTTGCAAAATATGTGCGAGTTGAATATGTCTCACAATAATCTCGTTGGTTCAATTCCTAATATTCAATTGAAGCTTTTTTGCAGACCGTCTATAAATTTAAATTCAAATAAATTTGAGGGAAAAGTTCCATCATTTTTGCTACAAGCTTCAGAGTTGTTACTCTCGGCAAATAAATTTTCTGATTTTTATTCATTCTTATGTGGAAACATCACAGCTACAAACTTGGCTACTTTCGATTTATCATATAATCAAATAAAGGGACAACTTCCAGATTGTTGGAAATATGTAGACCAATTATTGTTTCTTGATTTAAGCAACAATAAACTGTCAGGGAAGATTCCTATCTCCATGGGCAGCCTTGTTAATTTGGAAGCTTTGGTTTTACAAAACAATAGTTTAATGGGTGAATTGCCTTCCTCTTTGAAGAATTGCAACCATTTAATTATGCTGGATGTGAGTGAGAATATGTTGTCCGGTCCAATACCATCCTGGGTTGGAGAAAGCCTGCAGCAATTGATAATCTTGATCATGCGAGGGAATCAGTTCTCTGGAAATCTTCCCCTTCATCTATGTTATTTGAAGCGTATTCAATTGTTGGATCTTTCAAGGAATAAGTTATCAGAAGGAATTCCATCTTGCTTCAAGAATTTTACCGCATTGTCTGGAAAGAGCATCGATAGAATCGAAACTGAAAGACGTGTGCATTGGTACAATAGTACTTACTATGCCAATTATAGTTTTTTCAGTGATAATTATTATACGCTTCACGTAACATGGATATGGAAAGGTGTGGAACGCAACTTTACAAGTCCCGAATTGATTCTTCAGAGCATTGATCTCTCAAGTAACAATTTAACAGGTGAAATGCCAAAAGAGATTACATATATGATTGGGTTAGTTTCTTTGAATTTATCAAGAAACAGTTTGAGTGGAGAAATTCCTGCTGACATTGGGAATTTAAATTCACTTGAATTTCTTGACTTATCAAGAAATCAATTCTTCGGGAGAATTCCTTCTTCTATTTCTCAAATTGATTCTCTAGGAAAATTAGACTTGTCACATAACTCACTTTCTGGAAGAATCCCATTGGGAAGACACTTGGATACATTTGATGCTTCTTGTTATGAAGGAAATATTGATCTTTGTGGTAAACCTCTTGAAAAAAGGTGCCCTGGAGATGAGAGAGTGACAAAGTGTGAAGGAGGAGAAGTGCATGATGAAGGTGATGATTCAGCATTGTATGGAGCATTATACATGAGCTTAGGGCTGGGATTTTTGACAGGCTTCTGGGGCTTATTAGGGCCATTACTAGTTTGGGAAGCATGGAGAATTGCTTACATGAGGTTCTTGACCAGACTGACAGACTATATTCTTGTAATGGTTGAAGTGAAGATAGCAAAGTGCCAAAGGTGGTTCAAACACTAG 3393 0.3767 MSAYFLRTFYVLLLLLLHTSGIVAAFNSSSESMEAKCKERERQALLSFKQSLVDDSAMLSTWTDVHRDCCKWKGIQCDNQTGHVRVLDLHGNHDFELYFGGDINFTSLIHLQYIQHLDLSNNQFLSYIPEFIVSFTNLRFLNLSNSDILGRIPSELGNLLQLRYLDLGDNYLWGEIPVQIGNLIHLQYLDLGGFYLSGKIPCQIGNLRKLQYLSLGSNTFLNINSMGDYVSNTLSGGIPFHIGNLPFLHTLRLGGNFDIKAEDAQWLSTLHSLTILELSSVHKLGSSHQWLQTISKLIPNLKELRLIDCNLFDNDIQSLFHSPSSNFSTSLTILDLSSNMLTSSSTLQLLFNFSLHLQELHLSYNNFAFSPSLRPDFPSLKILDLSYSSLTSSMFLANFSVSSKLQKLHLRNCSLIDRNFLVSSSSTMNSLSSLQYLNLSNNLLKSCSIFHWLSNFTTNLHTLLLPFNFLEGPIPDDFGKAMNSLEFVYLFNNKLQGKVPYFFGSMCRLQTIDLENNRLNGEFSSFIQNSSWCNIHMLRILRLSHNQITGKIPQSISLLSELEHLSLEGNSLEGDVTESHLSNFSKLEVLFLSHNSLSLKFGSSWMPPFRLWSLGLASCKLGPNFPSWLQTQSSLIQLDISDNGLNDSAPEWFWNKLQNMCELNMSHNNLVGSIPNIQLKLFCRPSINLNSNKFEGKVPSFLLQASELLLSANKFSDFYSFLCGNITATNLATFDLSYNQIKGQLPDCWKYVDQLLFLDLSNNKLSGKIPISMGSLVNLEALVLQNNSLMGELPSSLKNCNHLIMLDVSENMLSGPIPSWVGESLQQLIILIMRGNQFSGNLPLHLCYLKRIQLLDLSRNKLSEGIPSCFKNFTALSGKSIDRIETERRVHWYNSTYYANYSFFSDNYYTLHVTWIWKGVERNFTSPELILQSIDLSSNNLTGEMPKEITYMIGLVSLNLSRNSLSGEIPADIGNLNSLEFLDLSRNQFFGRIPSSISQIDSLGKLDLSHNSLSGRIPLGRHLDTFDASCYEGNIDLCGKPLEKRCPGDERVTKCEGGEVHDEGDDSALYGALYMSLGLGFLTGFWGLLGPLLVWEAWRIAYMRFLTRLTDYILVMVEVKIAKCQRWFKH 1130
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Spst4g03353 1130 Gene3D Ribonuclease Inhibitor 685 1049 IPR032675 -
Spst4g03353 1130 Gene3D Ribonuclease Inhibitor 532 684 IPR032675 -
Spst4g03353 1130 FunFam Leucine-rich repeat receptor-like protein kinase 38 202 - -
Spst4g03353 1130 Pfam Leucine Rich Repeat 852 873 IPR001611 GO:0005515
Spst4g03353 1130 FunFam LRR receptor-like serine/threonine-protein kinase ERECTA 726 817 - -
Spst4g03353 1130 FunFam LRR receptor-like serine/threonine-protein kinase GSO1 446 725 - -
Spst4g03353 1130 Pfam Leucine rich repeat 931 989 IPR001611 GO:0005515
Spst4g03353 1130 Pfam Leucine rich repeat 730 789 IPR001611 GO:0005515
Spst4g03353 1130 SUPERFAMILY L domain-like 907 1020 - -
Spst4g03353 1130 FunFam LRR receptor-like serine/threonine-protein kinase ERECTA 928 1046 - -
Spst4g03353 1130 Pfam Leucine rich repeat N-terminal domain 40 78 IPR013210 -
Spst4g03353 1130 Gene3D Ribonuclease Inhibitor 302 531 IPR032675 -
Spst4g03353 1130 Gene3D Ribonuclease Inhibitor 229 301 IPR032675 -
Spst4g03353 1130 PRINTS Leucine-rich repeat signature 849 862 - -
Spst4g03353 1130 PRINTS Leucine-rich repeat signature 755 768 - -
Spst4g03353 1130 Gene3D Ribonuclease Inhibitor 36 228 IPR032675 -
Spst4g03353 1130 SUPERFAMILY L domain-like 450 701 - -
Spst4g03353 1130 SMART LRR_typ_2 976 1000 IPR003591 -
Spst4g03353 1130 SMART LRR_typ_2 159 183 IPR003591 -
Spst4g03353 1130 SMART LRR_typ_2 506 534 IPR003591 -
Spst4g03353 1130 SMART LRR_typ_2 535 559 IPR003591 -
Spst4g03353 1130 SMART LRR_typ_2 776 800 IPR003591 -
Spst4g03353 1130 SMART LRR_typ_2 849 872 IPR003591 -
Spst4g03353 1130 SMART LRR_typ_2 952 975 IPR003591 -
Spst4g03353 1130 SMART LRR_typ_2 431 452 IPR003591 -
Spst4g03353 1130 SMART LRR_typ_2 111 135 IPR003591 -
Spst4g03353 1130 SUPERFAMILY L domain-like 687 876 - -
Spst4g03353 1130 ProSiteProfiles Leucine-rich repeat profile. 433 454 IPR001611 GO:0005515
Spst4g03353 1130 SMART LRR_sd22_2 728 754 - -
Spst4g03353 1130 SMART LRR_sd22_2 976 1002 - -
Spst4g03353 1130 SMART LRR_sd22_2 328 349 - -
Spst4g03353 1130 SMART LRR_sd22_2 849 868 - -
Spst4g03353 1130 SMART LRR_sd22_2 776 802 - -
Spst4g03353 1130 SMART LRR_sd22_2 159 185 - -
Spst4g03353 1130 SMART LRR_sd22_2 559 586 - -
Spst4g03353 1130 SMART LRR_sd22_2 506 537 - -
Spst4g03353 1130 SUPERFAMILY L domain-like 56 456 - -
Spst4g03353 1130 ProSiteProfiles Leucine-rich repeat profile. 330 351 IPR001611 GO:0005515
Spst4g03353 1130 ProSiteProfiles Leucine-rich repeat profile. 537 559 IPR001611 GO:0005515
Spst4g03353 1130 PANTHER LRR RECEPTOR-LIKE KINASE 231 556 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Spst4g03353 Spst-Chr4 73519966 73523358 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Spst4g03353 37 699 Receptor kinase-like Gene Family AT4G04220 27.356 4.68e-39 155
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Spst4g03353 - - vun:114180773 1555.81
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Spst4g03353 4 73519966 73523358 Spst4g03353 4 73519966 73523358 ECH