Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Spst4g03240 ATGACGGATGTGGTACTGCATATATACGATGTGACGAATAGTGGATCGGAGAAAACCAATAACACCATTGTTCAGATCAACAAGATCTTCAAGGATGGGATTGGTCTCGGTGGCATTTTCCACAGCGCCGTGCAGGTTTATGGAGATGATGAATGGTCATTTGGATTCTGTGATCAAGGTACTGGAGTTTTTAGTTGCCCTTCTGGAAAGAATCCAATGTACACATATCGGGAGTCGATTGTTCTTGGGAAAACAAACTTTTCTATTTTCAAGGTGAATCAAATACTAAGAGAACTGAGTAGAGAGTGGCCAGGGAGTTCATATGATCTGCTGGCCAAAAACTGCAATCACTTCTGTGATGAATTCTGTGAAAGGCTTGGTGTACCAAAACTTCCAGGTTGGGTTAATAGGTTTGCCAATGCCGGTGATACTGCTATGGAAGTGGCTGGAAATACTGCATTACGGTTCCGGCAAGCTAAAACCGAGATTGTATCAGCAAGCAAAGTAGCATACCGGTTCCTCTTAGGTGTTACGAATAATGTTACTAATAACGTTAAGAATGGTCCCGAGTCCCCTAACAATTCAAACAGAGGAGGGTCCCCTAGATTTCAAGCTACTTGGTTGAAAAATATGATCACCAATGGTGCAAAACCGTCTACCAGTTCTGAAGGTGAGAATCAGAATGGAGTTACTCCTCTTCCGCCAAAGCGAGAAGATGACAAGGCATTCCTGCACAGTCCATCTTCACACGATAGTTGA 759 0.4321 MTDVVLHIYDVTNSGSEKTNNTIVQINKIFKDGIGLGGIFHSAVQVYGDDEWSFGFCDQGTGVFSCPSGKNPMYTYRESIVLGKTNFSIFKVNQILRELSREWPGSSYDLLAKNCNHFCDEFCERLGVPKLPGWVNRFANAGDTAMEVAGNTALRFRQAKTEIVSASKVAYRFLLGVTNNVTNNVKNGPESPNNSNRGGSPRFQATWLKNMITNGAKPSTSSEGENQNGVTPLPPKREDDKAFLHSPSSHDS 252
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Spst4g03240 252 SMART DUF862_2a 2 157 IPR008580 GO:0008233
Spst4g03240 252 Pfam PPPDE putative peptidase domain 3 146 IPR008580 GO:0008233
Spst4g03240 252 Gene3D PPPDE domains 1 169 IPR042266 -
Spst4g03240 252 PANTHER DESUMOYLATING ISOPEPTIDASE 2 194 IPR008580 GO:0008233
Spst4g03240 252 MobiDBLite consensus disorder prediction 182 229 - -
Spst4g03240 252 ProSiteProfiles PPPDE domain profile. 2 148 IPR008580 GO:0008233
Spst4g03240 252 MobiDBLite consensus disorder prediction 234 252 - -
Spst4g03240 252 MobiDBLite consensus disorder prediction 182 252 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Spst4g03240 Spst-Chr4 72131730 72134951 Transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Spst4g03240 - - gmx:100814440 473.781
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Spst4g03240 4 72131730 72134951 Spst4g03240 4 72131730 72134951 ECH