Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Spst4g03229 ATGGGTTCTCGTTACGAGGTGGAAGTGAAGCTCTCATCGGCGCGTGGGTTGAAGAACGTGAACTGGCGCAACGGCGCGAATCGCCCGTACGTCGTCGTTTGGGTGGATCCCAGCAACAAGCTCTCCACGCACGTGGACGAGAACGGTGATACGGACGCGAATTGGGATCAGACGCTCGTAATTCCGTTACCGCCGAAGCCCCTCGAAGATCAGACGCTTTACATCGACGTGGTTCACGCCGGCTCGGAGGAAGACACCAAGCCGCTCATCGGCTCGGCTCGGCTCAAGCTCACGGAGGTTCTCAACGACGTCGGAATGGGCGAGCGCCTGGGCCGCACTCTCACGCTGAAGCGTCCCTCGGGAAGACCGCAAGGGAAGGTTGAGGTTAGCGTGACAATCAGGGAGCCCCGCTATCCTGCGCCTGGTGCGTACAACGCGCCGGGTTACGGCGTGAGGGATTATTCCCCTGCGCCCCAGGCCTATGGGTACCCTCCCTACGGTGCTCCGCAGCAAGGCGCGTATTATTCTGCCGCGCCCCCAAGTGGGTATCCTTATAATGCGCCTACGCAGGGTTATGGTGCGCCACCGCAGAGTGGGTACGGCTATAATGCGCCGCCGCAAACGGCGTCGTATGGACAGGGGAGCGAGTACGGGTACGCGCCAAAGGAGGAGAAAAAGAAGAGTAAGTTTGGGGGGATGGGGACAGGATTGGCTGTGGGCGCGGTCGCTGGGGTTCTAGGTGGAGTCGCGCTTGTCGAGGGTGCTGAGTTTCTCGAGAACAAAATTGCTGATGACGTGGCCGAAAGGGTGGAGGATGATCTTGGTTACGATGGTGATGACTTTTAG 846 0.5981 MGSRYEVEVKLSSARGLKNVNWRNGANRPYVVVWVDPSNKLSTHVDENGDTDANWDQTLVIPLPPKPLEDQTLYIDVVHAGSEEDTKPLIGSARLKLTEVLNDVGMGERLGRTLTLKRPSGRPQGKVEVSVTIREPRYPAPGAYNAPGYGVRDYSPAPQAYGYPPYGAPQQGAYYSAAPPSGYPYNAPTQGYGAPPQSGYGYNAPPQTASYGQGSEYGYAPKEEKKKSKFGGMGTGLAVGAVAGVLGGVALVEGAEFLENKIADDVAERVEDDLGYDGDDF 281
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Spst4g03229 281 SUPERFAMILY C2 domain (Calcium/lipid-binding domain, CaLB) 4 134 IPR035892 -
Spst4g03229 281 PANTHER INGRESSION PROTEIN FIC1 7 241 - -
Spst4g03229 281 Pfam C2 domain 7 102 IPR000008 -
Spst4g03229 281 Gene3D C2 domain 4 137 IPR035892 -
Spst4g03229 281 CDD C2_SRC2_like 6 129 IPR044750 GO:0006952
Spst4g03229 281 SMART C2_3c 6 109 IPR000008 -
Spst4g03229 281 ProSiteProfiles C2 domain profile. 1 111 IPR000008 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Spst4g03229 Spst-Chr4 71998734 71999579 Dispersed/Transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Spst4g03229 - - gmx:100817630 433.335
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Spst4g03229 4 71998734 71999579 Spst4g03229 4 71998734 71999579 ECH