Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Spst4g03205 ATGGCTTCTGTCTCCCTTCTTCTCGCCATGCTCTTGTTCTTCGTAATTGGCACATCTCTGTCGGACAGTAGGAAGGAATTAAGGAACAAGGAGAAAACTGCATTACAGATGTCAGAGCACTCGGTCCATTATCCCAACAGTATTAACCCATCGCGTGTTGTCCAAATCTCTTGGCAACCAAGGGTTTTTCTATATAAAGGTTTTCTGTCTGACAAGGAGTGTGAATACCTTATTTCTTTGGCATATGCTGAGAAAGAAAAATCCTCAGGGAATGGTGGGACCTCCTTGGATAAGGAAGATGAAATTCTTGCGAGGATTGAAGAAAGACTTTCAGTTTGGACTTTCCTTCCTAAAGAGAACAGCAAGCCTTTACAGGTCATGCAATATGGGCCTGAGCAGGATGGTCAGACCTTAGATTATTTTACAAACAAAACCTATTTGGAATTAAGTGGACCTTTAATGGCAACAGTTGTTTTATATCTCTCAGACTCTTCTCAAGGGGGTCAAATTCTCTTTCCTGAATCAGTGCCAAGTAGTGGCGGCTGGTCAAGTTGCAGTAACAGTAACAAGACTCTCCAACCAGTAAAAGGGAATGCAATTCTGTTTTTCTCTCTTCACCTAAGTGCTTCTCCTGACAAGAGTAGCTTCCATTCTAGATGCCCTGTCCTTGAAGGAGACATGTGGTCTGCAATTAAATACTTCTATGCAAAACCAATCAGAGGCAAGGTCTCAACCATGTCAGAAGATGGTGAATGCACTGATGAAGATGACGGTTGTCCTGCTTGGGCAGCCATGGGAGAATGTCAAAGAAACCCTGTGTTCATGATTGGATCTCCTGATTATTATGGTACATGTAGGAAAAGTTGTAATGCATGCTGA 879 0.4255 MASVSLLLAMLLFFVIGTSLSDSRKELRNKEKTALQMSEHSVHYPNSINPSRVVQISWQPRVFLYKGFLSDKECEYLISLAYAEKEKSSGNGGTSLDKEDEILARIEERLSVWTFLPKENSKPLQVMQYGPEQDGQTLDYFTNKTYLELSGPLMATVVLYLSDSSQGGQILFPESVPSSGGWSSCSNSNKTLQPVKGNAILFFSLHLSASPDKSSFHSRCPVLEGDMWSAIKYFYAKPIRGKVSTMSEDGECTDEDDGCPAWAAMGECQRNPVFMIGSPDYYGTCRKSCNAC 292
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Spst4g03205 292 SMART p4hc 60 235 IPR006620 GO:0005506|GO:0016705|GO:0031418
Spst4g03205 292 Gene3D q2cbj1_9rhob like domain 52 235 - -
Spst4g03205 292 SMART ShkT_1 251 292 IPR003582 -
Spst4g03205 292 FunFam Probable prolyl 4-hydroxylase 12 52 235 - -
Spst4g03205 292 Pfam 2OG-Fe(II) oxygenase superfamily 125 235 IPR044862 -
Spst4g03205 292 ProSiteProfiles ShKT domain profile. 252 292 IPR003582 -
Spst4g03205 292 PANTHER PROLYL 4-HYDROXYLASE ALPHA SUBUNIT 26 233 IPR045054 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Spst4g03205 Spst-Chr4 71726378 71729723 Transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Spst4g03205 K00472 - gmx:100795761 474.937
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Spst4g03205 4 71726378 71729723 Spst4g03205 4 71726378 71729723 ECH